icescreen_formatting/genbank_to_gff3_and_fasta.py: AttributeError: 'SeqFeature' object has no attribute 'strand'

This error is due to an incompatibility between two dependencies: bcbio-gff version 0.7.0 and biopython version 1.82.

assigned to @thomas.lacroix

work around: in the conda enviroment icescreen_env, downgrade biopython to version 1.81:

conda activate icescreen_env_X-X-X
conda install -c conda-forge biopython=1.81

changed the description

changed the description

mentioned in commit b4d1e00b

fixed in v1.3.1

closed