md5sum different on ng6 and NGL?
find the explanation. Extracting metadata file for raw read submission from ng6 and NGL for the same run/project to compare, we found a difference in md5sum.
- in file extracted from NGL : | SAMEA115021536_S20_L001_R1_001.fastq.gz | 70890cf24bc42f22de6678509de51915
- inputdir found in /work/project/PlaGe/nextflow/wf-illumina-nf/240212_A00318_0475_BHWGKWDSX7_Lane1_1707895060/1_OCU-GRAAL_OCU-GRAAL-Pool/1_OCU-GRAAL_OCU-GRAAL-Pool_4545954.out : /work/project/PlaGe/data/NovaSeq/240212_A00318_0475_BHWGKWDSX7_Lane1_1707895060
- md5sum /work/project/PlaGe/data/NovaSeq/240212_A00318_0475_BHWGKWDSX7_Lane1_1707895060/OCU-GRAAL/SAMEA115021536_S20_L001_R1_001.fastq.gz : 70890cf24bc42f22de6678509de51915
- md5sum /save/ng6/data/run/414ccac7e/SAMEA115021536_GCACGGAC-TGCGAGAC-BHWGKWDSX7_L001_R1.fastq.gz : 70890cf24bc42f22de6678509de51915
seems we have the same md5sum in NGL, on server for NGL and NG6.....but differs in OCU_GRAAL_Run1.tsv.... @ckuchly can you check your workflow for OCU_GRAAL_Run1.tsv creation and md5sum affectation please