... | ... | @@ -120,7 +120,7 @@ Example : |
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--assembly-annot file=workflows/rnaseqdenovo/data/best_annotation_file.gff3 software-name=blastall software-parameters="-e 10e-10" \
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software-version="2.2.26" comments="Annotations against swissprot"
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```
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If you do not provide a best annotation file (one contig per line in this file, see [[annotation file]] format) then you can specify which annotation source (source column of the GFF3 file) has to be used by the pipeline in order to compute the contigs best annotation.
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If you do not provide a best annotation file (one contig per line in this file, see annotation file format) then you can specify which annotation source (source column of the GFF3 file) has to be used by the pipeline in order to compute the contigs best annotation.
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Example :
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```bash
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