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# Prerequists
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* [java](http://www.java.com/fr/download/): to run the biomart server (only java 6 is supported)
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* [python](http://www.python.org/): the supported versions are 2.7 or higher. Modules required :
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** argparse
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** MySQLdb
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** Numpy
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* argparse
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* MySQLdb
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* Numpy
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* a [mysql](http://www.mysql.fr/) database: the database should be accessible from the application with a user/password with create/truncate permissions.
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* [makeblastdb, blastn, tblastn & blast_formatter](http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&PAGE_TYPE=BlastDocs&DOC_TYPE=Download) to perform blast from the graphical user interface.
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* [samtools](http://sourceforge.net/projects/samtools/): samtools '''0.1.19''' provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format.
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