Add diamond aligner (405f52eb) · Commits · genotoul-bioinfo / ngspipelines · GitLab

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A compter du 1er avril, attention à vos pipelines : Nouvelles limitations de Docker Hub

405f52eb

Commit 405f52eb authored 8 years ago by Celine Noirot

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Add diamond aligner

parent eaabbeb8

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Changes 7

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application.properties 9 additions, 7 deletions

application.properties
workflows/rnaseqdenovo/__init__.py 37 additions, 15 deletions

workflows/rnaseqdenovo/__init__.py
workflows/rnaseqdenovo/components/blast.py 7 additions, 7 deletions

workflows/rnaseqdenovo/components/blast.py
workflows/rnaseqdenovo/components/diamond.py 91 additions, 0 deletions

workflows/rnaseqdenovo/components/diamond.py
workflows/rnaseqdenovo/data/process/contigs.fa 2 additions, 2 deletions

workflows/rnaseqdenovo/data/process/contigs.fa
workflows/rnaseqdenovo/data/process/ebi_swissprot_filter_diamond.dmnd 0 additions, 0 deletions

...aseqdenovo/data/process/ebi_swissprot_filter_diamond.dmnd
workflows/rnaseqdenovo/data/process/rnaseqdenovo.cfg 20 additions, 4 deletions

workflows/rnaseqdenovo/data/process/rnaseqdenovo.cfg

with 166 additions and 35 deletions

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