Merge requests · genotoul-bioinfo / metagWGS

V2.4 Add coassembly and replace bin refinement with binette

!25 · created Jan 26, 2023 by VIENNE MAINA V2.4 - Various workflows and documentation improvments
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updated Jan 26, 2023
manage coassembly for step 2

!24 · created Jan 10, 2023 by VIENNE MAINA devel
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updated Jan 10, 2023
Remove prokka

!23 · created Oct 27, 2022 by Jean Mainguy devel
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updated Oct 27, 2022
Hotfix for metagWGS v3.2.1

!22 · created Oct 27, 2022 by Jean Mainguy
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updated Oct 27, 2022
Do checkpoint on values after Cdhit #30

!21 · created Aug 18, 2022 by Celine Noirot Issues en vrac devel Enhancement
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updated Aug 18, 2022
Adding possibility to give flowcell information on samplesheet

!20 · created Jul 26, 2022 by VIENNE MAINA devel
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updated Jul 26, 2022
Jean.mainguy master patch 09797

!19 · created May 30, 2022 by Jean Mainguy devel
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updated May 30, 2022
Revert "Merge branch 'jean.mainguy-master-patch-09797' into 'master'"

!18 · created May 30, 2022 by Jean Mainguy
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updated May 30, 2022
add description of top taxon output added in commit 2e1644f51400ebdd514fe538b9ba16e39a06cbde #185

!17 · created May 30, 2022 by Jean Mainguy
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updated May 30, 2022
Devel

!16 · created Feb 01, 2022 by Jean Mainguy Bug
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updated Feb 01, 2022
DSL2

!15 · created Jan 14, 2022 by Celine Noirot V2.2 DSL2 transition
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updated Jan 14, 2022
Dev docs

!14 · created Jan 14, 2022 by Celine Noirot V2.2 DSL2 transition dev
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updated Jan 14, 2022
Merge dsl2 in dev to finalize dsl1 to dsl2 transition

!12 · created Dec 13, 2021 by MARTIN Pierre V2.2 DSL2 transition dev
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updated Dec 13, 2021
MR before tag 2.1

!11 · created Sep 27, 2021 by MARTIN Pierre V2.1 Tests fonctionnels
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updated Sep 27, 2021
Functional tests implementation + refactoring + documentation

!9 · created Sep 16, 2021 by MARTIN Pierre Issues en vrac dev
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updated Sep 16, 2021
Merge dev into master for version 2.0.

!8 · created Feb 25, 2021 by Joanna Fourquet V2.0
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updated Feb 25, 2021
Merge dev into master for version 2.0.

!7 · created Feb 24, 2021 by Joanna Fourquet V2.0
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updated Feb 24, 2021
Refactoring for multiqc

!6 · created Apr 16, 2020 by Celine Noirot V2.0 dev Enhancement
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updated Apr 16, 2020
5!

!5 · created Dec 18, 2019 by Joanna Fourquet V1.1- Contig affilation and binning
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updated Dec 18, 2019
Dev

!4 · created Jul 01, 2019 by Joanna Fourquet V1 - First Version for HiSeq sequences
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updated Jul 01, 2019