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genotoul-bioinfo
metagWGS
Commits
59450d6d
Commit
59450d6d
authored
1 year ago
by
Claire Hoede
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remove trace of conflict
parent
5e995f60
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Pipeline
#240904
waiting for manual action
Stage: build
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modules/sum_up_bins_informations.nf
+0
-11
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modules/sum_up_bins_informations.nf
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modules/sum_up_bins_informations.nf
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View file @
59450d6d
process
GENOMES_ABUNDANCES_PER_SAMPLE
{
publishDir
"${params.outdir}/08_binning"
,
mode:
'copy'
<<<<<<<
HEAD
=======
executor
"slurm"
>>>>>>>
c084db3
(
run
in
slurm
executor
to
avoid
bug
in
genobioinfo
cluster
)
input:
path
coverage_files
path
flagstats_files
...
...
@@ -63,13 +58,7 @@ process ADD_QUAST_INFO_TO_BINS {
process
BINS_STATS_TO_MUTLIQC_FORMAT
{
publishDir
"${params.outdir}/08_binning/08_4_mapping_on_final_bins/stats"
,
mode:
'copy'
<<<<<<<
HEAD
=======
executor
"slurm"
>>>>>>>
4
d560dc
(
problem
with
memory
in
local
execute
BINS_STATS_TO_MULTIQC_FORMAT
with
slurm
)
input:
path
bins_stats
path
multiqc_header_count
...
...
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