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Release notes

D-Genies 1.2.0

Major changes

  • Dot plot have now a mouse cursor centered zoom
  • Now includes mashamap, a faster aligner for high identity genomes, as an alternative to minimap2 (Linux only)
  • Download an HTML page which allow to show an interactive dot plot offline (with the summary)
  • Display match coordinates by moving the mouse cursor over the match line

Other changes

  • Upgrade embedded minimap2 to the latest available version (2.11)
  • Add help messages on the interface
  • Add the ability to add a message to the run form through command line (designed for maintenance for example)
  • Several bug fixes

How to install?

See instructions here

Downloads

Source code
Windows installer

Release notes

D-Genies 1.1.1

Changes

  • Fix bug with parse of MAF files
  • Fix incompatibility with pip >= 10.0

How to install?

See instructions here

Downloads

Source code
Windows installer

Release notes

D-Genies 1.1.0

Major changes

  • Improve run form: add support for uploading an alignment file (PAF or MAF by default) instead of fasta files, if alignment file is already available
  • Add export of a job into a backup, which can be re-uploaded with the run form
  • Ease the integration of new tools or new file formats
  • Allow to install as simple user on Unix systems

Other changes

  • Export of the dot plot is now done including the zoom factor
  • Add new color palettes for dot plot
  • Add analytics logs (anonymous) which permits to know which size of genomes are ploted (can be disabled)
  • Improve documentation
  • Minor bug fixes

How to install?

See instructions here

Downloads

Source code
Windows installer

Release notes

D-Genies 1.0.1

Bug fix release.

Changes

  • Fix bugs
  • Disable export of fasta files for gallery items

How to install?

See instructions here

Downloads

Source code
Windows installer

Release notes

D-Genies 1.0.0

First stable release.

How to install?

See instructions here

Downloads

Source code
Windows installer