Release notes
D-Genies 1.2.0
Major changes
- Dot plot have now a mouse cursor centered zoom
- Now includes mashamap, a faster aligner for high identity genomes, as an alternative to minimap2 (Linux only)
- Download an HTML page which allow to show an interactive dot plot offline (with the summary)
- Display match coordinates by moving the mouse cursor over the match line
Other changes
- Upgrade embedded minimap2 to the latest available version (2.11)
- Add help messages on the interface
- Add the ability to add a message to the run form through command line (designed for maintenance for example)
- Several bug fixes
How to install?
See instructions here
Downloads
Release notes
D-Genies 1.1.1
Changes
- Fix bug with parse of MAF files
- Fix incompatibility with pip >= 10.0
How to install?
See instructions here
Downloads
Release notes
D-Genies 1.1.0
Major changes
- Improve run form: add support for uploading an alignment file (PAF or MAF by default) instead of fasta files, if alignment file is already available
- Add export of a job into a backup, which can be re-uploaded with the run form
- Ease the integration of new tools or new file formats
- Allow to install as simple user on Unix systems
Other changes
- Export of the dot plot is now done including the zoom factor
- Add new color palettes for dot plot
- Add analytics logs (anonymous) which permits to know which size of genomes are ploted (can be disabled)
- Improve documentation
- Minor bug fixes
How to install?
See instructions here
Downloads
Release notes
D-Genies 1.0.1
Bug fix release.
Changes
- Fix bugs
- Disable export of fasta files for gallery items
How to install?
See instructions here