gat_variantFiltration, initialisation workflow

de9f4253 · mariabernard · Kenza Bazi-Kabbaj · 52badb4b · de9f4253 · de9f4253
Commit de9f4253 authored 6 years ago by mariabernard Committed by Kenza Bazi-Kabbaj 6 years ago
--- a/Snakemake/gatk_variantFiltration/README.md
+++ b/Snakemake/gatk_variantFiltration/README.md
--- a/Snakemake/gatk_variantFiltration/Snakefile
+++ b/Snakemake/gatk_variantFiltration/Snakefile
--- a/Snakemake/gatk_variantFiltration/config.yaml
+++ b/Snakemake/gatk_variantFiltration/config.yaml
--- a/Snakemake/gatk_variantFiltration/resources_SLURM.yaml
+++ b/Snakemake/gatk_variantFiltration/resources_SLURM.yaml
--- a/Snakemake/gatk_variantFiltration/rules/hardfiltering.smk
+++ b/Snakemake/gatk_variantFiltration/rules/hardfiltering.smk
--- a/Snakemake/gatk_variantFiltration/rules/intersect_vcf.smk
+++ b/Snakemake/gatk_variantFiltration/rules/intersect_vcf.smk
--- a/Snakemake/gatk_variantFiltration/rules/split_vcf.smk
+++ b/Snakemake/gatk_variantFiltration/rules/split_vcf.smk
--- a/Snakemake/gatk_variantFiltration/rules/vqsr.smk
+++ b/Snakemake/gatk_variantFiltration/rules/vqsr.smk
--- a/Snakemake/gatk_variantFiltration/test_SLURM.sh
+++ b/Snakemake/gatk_variantFiltration/test_SLURM.sh