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Commit ce97ae6e authored by mariabernard's avatar mariabernard
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IMAGE_vqsr : rename recal.idx output files

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Snakemake/IMAGE_vqsr/rules/vqsr.smk
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......@@ -56,7 +56,7 @@ rule ApplyRecalibration:
R = "results/VQSR/{GATK_input_prefix}_{var}.R"
output:
vcf = "results/VQSR/{GATK_input_prefix}_vqsr_{var}.vcf.gz",
idx = temp("results/VQSR/{GATK_input_prefix}_vqsr_{var}.recal.idx")
idx = temp("results/VQSR/{GATK_input_prefix}_{var}.recal.idx")
log:
"results/VQSR/logs/{GATK_input_prefix}_vqsr_{var}.log"
params:
......
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