rename gatk_variantFiltration to IMAGE_vqsr
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- Snakemake/IMAGE_vqsr/README.md 0 additions, 0 deletionsSnakemake/IMAGE_vqsr/README.md
- Snakemake/IMAGE_vqsr/Snakefile 0 additions, 0 deletionsSnakemake/IMAGE_vqsr/Snakefile
- Snakemake/IMAGE_vqsr/config.yaml 0 additions, 0 deletionsSnakemake/IMAGE_vqsr/config.yaml
- Snakemake/IMAGE_vqsr/data/dbSNP_Gallus_gallus_filtered_sorted_1.vcf 0 additions, 0 deletions...IMAGE_vqsr/data/dbSNP_Gallus_gallus_filtered_sorted_1.vcf
- Snakemake/IMAGE_vqsr/data/ensembl_gallus_gallus_1.fasta 0 additions, 0 deletionsSnakemake/IMAGE_vqsr/data/ensembl_gallus_gallus_1.fasta
- Snakemake/IMAGE_vqsr/data/variants_freebayes.vcf.gz 0 additions, 0 deletionsSnakemake/IMAGE_vqsr/data/variants_freebayes.vcf.gz
- Snakemake/IMAGE_vqsr/data/variants_freebayes.vcf.gz.tbi 0 additions, 0 deletionsSnakemake/IMAGE_vqsr/data/variants_freebayes.vcf.gz.tbi
- Snakemake/IMAGE_vqsr/data/variants_gatk.vcf.gz 0 additions, 0 deletionsSnakemake/IMAGE_vqsr/data/variants_gatk.vcf.gz
- Snakemake/IMAGE_vqsr/data/variants_gatk.vcf.gz.tbi 0 additions, 0 deletionsSnakemake/IMAGE_vqsr/data/variants_gatk.vcf.gz.tbi
- Snakemake/IMAGE_vqsr/data/variants_mpileup.vcf.gz 0 additions, 0 deletionsSnakemake/IMAGE_vqsr/data/variants_mpileup.vcf.gz
- Snakemake/IMAGE_vqsr/data/variants_mpileup.vcf.gz.tbi 0 additions, 0 deletionsSnakemake/IMAGE_vqsr/data/variants_mpileup.vcf.gz.tbi
- Snakemake/IMAGE_vqsr/resources_SLURM.yaml 0 additions, 0 deletionsSnakemake/IMAGE_vqsr/resources_SLURM.yaml
- Snakemake/IMAGE_vqsr/rules/hardfiltering.smk 0 additions, 0 deletionsSnakemake/IMAGE_vqsr/rules/hardfiltering.smk
- Snakemake/IMAGE_vqsr/rules/intersect_vcf.smk 0 additions, 0 deletionsSnakemake/IMAGE_vqsr/rules/intersect_vcf.smk
- Snakemake/IMAGE_vqsr/rules/split_vcf.smk 0 additions, 0 deletionsSnakemake/IMAGE_vqsr/rules/split_vcf.smk
- Snakemake/IMAGE_vqsr/rules/vqsr.smk 0 additions, 0 deletionsSnakemake/IMAGE_vqsr/rules/vqsr.smk
- Snakemake/IMAGE_vqsr/test_SLURM.sh 0 additions, 0 deletionsSnakemake/IMAGE_vqsr/test_SLURM.sh
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