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Commit 274dafc9 authored by mariabernard's avatar mariabernard
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1000RNASeq_chicken ASE : do not use bin variable in config file for basic rule

parent 3730d27f
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......@@ -16,7 +16,7 @@ rule md5sum:
"{file}.md5"
shell:
"{config[bin][md5sum]} {input} > {output}"
"md5sum {input} > {output}"
rule tabix:
......@@ -27,5 +27,5 @@ rule tabix:
temp("{file}.tbi")
shell:
"{config[bin][tabix]} -p vcf {input} "
"tabix -p vcf {input} "
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