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Commit 8af74b4c authored by Alexis Mergez's avatar Alexis Mergez
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Update README.md

Added bashrc function to use PanGeTool more easely
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# PanGeTools
Apptainer container containing useful tools for pangenomics analysis. Versions of tools is reported in the definition file, in the help section.
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Apptainer container containing useful tools for pangenomics analysis. Versions of tools is reported in the definition file, in the help section.
Add the following function to your bashrc to have easier commands :
```
# Folder containing apptainer images (.sif)
apptainerpath="<path_to_apptainer_folder>"
# Function to easly run PanGeTools.
# The command is PanGeTools <tool name> <tool args>
PanGeTools() {
apptainer run --app $1 $apptainerpath/PanGeTools.sif "${@:2}"
}
```
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