Commits · acd44f5960fda6ba6e8ba22ab6d77580c22a9fda · QTL / spell-qtl

Aug 29, 2013
- Paper draft ( may evolve to Nature Genetics Technical Report) · acd44f59
  Sylvain Jasson authored 11 years ago
  
  acd44f59
Aug 01, 2013
- All tests pass. Test code coverage about OK. · 6870b5f9
  Damien Leroux authored 11 years ago
  
  6870b5f9
Jul 30, 2013
- Implemented cached and versatile polynoms. · 50d88c16
  Damien Leroux authored 11 years ago
  
  In particular, lumping is much faster. So is the segment computation.
  50d88c16
Jul 29, 2013
- "Catch" header file included so that tests compile. · 01a41282
  Damien Leroux authored 11 years ago
  
  01a41282
- New implementation of polynoms, with some tests. · 939ff866
  Damien Leroux authored 11 years ago
  
  939ff866
Jul 19, 2013
- F3 (Fn) Simulator with 1 QTL. · 1a2ee12e
  Damien Leroux authored 11 years ago
  
  1a2ee12e
Jul 02, 2013
- Multi-generation observations tested and approved. · 7705bb47
  Damien Leroux authored 11 years ago
  
  7705bb47
- Multi-generation observations now implemented. · ea311ac7
  Damien Leroux authored 11 years ago
  
  ea311ac7
- Added missing files to invoke OLD probapop. · 2e26ad31
  Damien Leroux authored 11 years ago
  
  2e26ad31
Jun 10, 2013
- Implemented outbred format and probabilities. · d351995f
  Damien Leroux authored 11 years ago
  
  d351995f
Jun 05, 2013
- Faster way to compute probabilities over segments. · 0560d457
  Damien Leroux authored 11 years ago
  
  0560d457
Jun 04, 2013
- RIL model works more than not. · d19e58f6
  Damien Leroux authored 11 years ago
  
  d19e58f6
Jun 03, 2013
- New model now works great even on RIL data. · c40435d5
  Damien Leroux authored 11 years ago
  
  c40435d5
May 21, 2013
- Added BC. · 12f9b636
  Damien Leroux authored 11 years ago
  
  12f9b636
May 18, 2013
- Added missing header. · 2406fe4e
  Damien Leroux authored 11 years ago
  
  2406fe4e
- Added misc test data files. · a0c67725
  Damien Leroux authored 11 years ago
  
  a0c67725
- Added requirement to run old probapop. · 72ff77ae
  Damien Leroux authored 11 years ago
  
  72ff77ae
- Added Makefile. · 789c641c
  Damien Leroux authored 11 years ago
  
  789c641c
May 17, 2013
- After lots of experiments, the algebraic_genotypes model seems to perform VERY well. · ea07914c
  Damien Leroux authored 11 years ago
  
  ea07914c
Apr 12, 2013
- Work in progress. · b8623abc
  Damien Leroux authored 11 years ago
  
  b8623abc
Apr 11, 2013
- F3 still buggy. Only the segments A* and *A work so far. · b32ce707
  Damien Leroux authored 11 years ago
  
  b32ce707
Apr 09, 2013
- Work in progress. · fae13d54
  Damien Leroux authored 11 years ago
  
  fae13d54
Apr 06, 2013
- The beginnings of probapop/MCQTL v6. · 720fd82f
  Damien Leroux authored 11 years ago
  
  720fd82f
Apr 05, 2013
- Moved includes into their rightful place. · ef2e1755
  Damien Leroux authored 11 years ago
  
  ef2e1755
- Added *real* polynom computations for transition probabilities for a given generation. · e4b8656c
  Damien Leroux authored 11 years ago
  
  e4b8656c
Apr 03, 2013
- Added q&d polynom and polynom matrix implementation. · bc19775f
  Damien Leroux authored 11 years ago
  
  bc19775f
- Now working very well with matrix operations, no more haplotype enumerations. · 0df4c02f
  Damien Leroux authored 11 years ago
  
  0df4c02f
- Added and modified example files. · 4bf8d588
  Damien Leroux authored 11 years ago
  
  4bf8d588
- The embryo of probapop is starting to emerge. · b447fbf9
  Damien Leroux authored 11 years ago
  
  b447fbf9
Mar 30, 2013
- Binary file has nothing to do there. · 80c4d6fd
  Damien Leroux authored 11 years ago
  
  80c4d6fd
- Moved include files. · f3110e3e
  Damien Leroux authored 11 years ago
  
  f3110e3e
- Added XML population design examples and reader. · dc35560c
  Damien Leroux authored 11 years ago
  
  dc35560c
Mar 29, 2013
- New files. read_data (gen) comes from carthagène. · 9bd43e4c
  Damien Leroux authored 11 years ago
  
  9bd43e4c
- Moved stuff to sandbox. · b3cf89c3
  Damien Leroux authored 11 years ago
  
  b3cf89c3
Jan 24, 2013
- Created include directory. Refactored XML library. · 7633e948
  Damien Leroux authored 12 years ago
  
  7633e948
- Expérimentations. XML bientôt C++ifié. · 5f4c1f5b
  Damien Leroux authored 12 years ago
  
  5f4c1f5b
Jan 18, 2013
- First experiment. · 16ffda29
  Damien Leroux authored 12 years ago
  
  16ffda29

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