Need to re-implement the creation of the LV.
Bayesian computation seems to work but we still need the output in the form of locus vectors.
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- include/bayes.h 1 addition, 1 deletioninclude/bayes.h
- include/bayes/graphnode2.h 578 additions, 572 deletionsinclude/bayes/graphnode2.h
- include/bayes/graphnode_base.h 23 additions, 14 deletionsinclude/bayes/graphnode_base.h
- src/bayes/generalized_product.cc 9 additions, 9 deletionssrc/bayes/generalized_product.cc
- src/bayes/jobs.cc 24 additions, 14 deletionssrc/bayes/jobs.cc
- src/bayes/test-data/bc2.gen 9 additions, 0 deletionssrc/bayes/test-data/bc2.gen
- src/bayes/test-data/bc2_1mark.gen 4 additions, 0 deletionssrc/bayes/test-data/bc2_1mark.gen
- src/bayes/test-data/bc2_pop.gen 9 additions, 0 deletionssrc/bayes/test-data/bc2_pop.gen
- src/bayes/test-data/f4.ped 15 additions, 0 deletionssrc/bayes/test-data/f4.ped
- src/bayes/test-data/f4_F4.gen 7 additions, 0 deletionssrc/bayes/test-data/f4_F4.gen
- src/bayes/test-data/f4_L.gen 7 additions, 0 deletionssrc/bayes/test-data/f4_L.gen
- src/bayes/test-data/format-02.xml 23 additions, 0 deletionssrc/bayes/test-data/format-02.xml
- src/bayes/test-data/format-ABHCD.xml 33 additions, 0 deletionssrc/bayes/test-data/format-ABHCD.xml
- src/bayes/test-data/lines.gen 9 additions, 0 deletionssrc/bayes/test-data/lines.gen
- src/bayes/test-data/test-sib-f4-F4.gen 3 additions, 0 deletionssrc/bayes/test-data/test-sib-f4-F4.gen
- src/bayes/test-data/test-sib-f4-L.gen 3 additions, 0 deletionssrc/bayes/test-data/test-sib-f4-L.gen
- src/bayes/test-data/test-sib-f4.ped 10 additions, 0 deletionssrc/bayes/test-data/test-sib-f4.ped
- src/bayes/test-data/test_cmd 1 addition, 0 deletionssrc/bayes/test-data/test_cmd
- src/bayes/test-data/toto.gen 9 additions, 0 deletionssrc/bayes/test-data/toto.gen
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