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This section will display, after selection of your genotypes of interest and location in the genome, a table with all the SNPs (Single Nucleotide Polymorphisms) and indels (small insertions or deletions) present in your selection.
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This section will display, after selection of your genotypes of interest and location in the genome, a table with all the SNPs (Single Nucleotide Polymorphisms) and indels (small insertions or deletions) present in your selection.
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It also gives informations about the potential effect and impact of these variations on the resulting protein.
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It also gives informations about the potential effect and impact of these variations on the resulting protein.
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./. = Missing data
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0/0 = No variation comparing to reference genome
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0/1 = Heterozygous variant for the 1rst ALT allele
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0/2 = Heterozygous variant for the 2nd ALT allele, etc.
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1/1 : Homozygous variant for the 1rst ALT allele
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2/2 : Homozygous variant for the 2nd ALT allele, etc.
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1/2 : Heterozygous variant containing the 1rst ALT and the 2nd ALT allele
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2/3 : the 2nd and the 3rd ALT allele, etc. |
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\ No newline at end of file |