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Please see [model description](ibasam) for full explanations, graphics of some of the mathematical functions used and code.
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IBASAM is made of 8 submodels representing fundamental biological processes :
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1. [Reproduction and redd creation](Reproduction)
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2. [Emergence from the redds and individual birth](Emergence)
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3. [Genetic coding and transmission](Genetic)
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4. [Growth](Growth)
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5. [Survival](Survival)
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6. [Smoltification](Smoltification)
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7. [Maturation](Maturation)
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8. [Migrations](Migrations)
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It also includes 1 submodel to simulate impact of fishing and 2 environmental submodels to simulate climate change :
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9. [Fishing](fishing)
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10. [River climate](riverclimate)
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11. [Ocean climate](oceanclimate)
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# How to use IBASAM?
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The IBASAM model was developed in C++ and interfaced as a shared library for R (R Development Core, 2010) to make easy the statistical analyses of model outputs. The C++ source codes and R scripts to create and use the model as R package are available online on Github. More detailed explanations are provided here:
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