fix: set dynamic mapping to false instead of strict + ignore xref counting

backend/src/test/resources/fr/inra/urgi/faidare/repository/es/setup/index/germplasmAttribute_mapping.json

 {
-  "dynamic": "strict",
+  "dynamic": false,
   "properties": {
     "germplasmAttributeURI": {
       "type": "keyword"

backend/src/test/resources/fr/inra/urgi/faidare/repository/es/setup/index/germplasmPedigree_mapping.json

 {
-  "dynamic": "strict",
+  "dynamic": false,
   "properties": {
     "germplasmPedigreeURI": {
       "type": "keyword"

backend/src/test/resources/fr/inra/urgi/faidare/repository/es/setup/index/germplasmProgeny_mapping.json

 {
-  "dynamic": "strict",
+  "dynamic": false,
   "properties": {
     "germplasmProgenyURI": {
       "type": "keyword"

backend/src/test/resources/fr/inra/urgi/faidare/repository/es/setup/index/germplasm_mapping.json

 {
-  "dynamic": "strict",
+  "dynamic": false,
   "properties": {
     "germplasmURI": {
       "type": "keyword"

backend/src/test/resources/fr/inra/urgi/faidare/repository/es/setup/index/location_mapping.json

 {
-  "dynamic": "strict",
+  "dynamic": false,
   "properties": {
     "locationURI": {
       "type": "keyword"

backend/src/test/resources/fr/inra/urgi/faidare/repository/es/setup/index/program_mapping.json

 {
-  "dynamic": "strict",
+  "dynamic": false,
   "properties": {
     "programURI": {
       "type": "keyword"

backend/src/test/resources/fr/inra/urgi/faidare/repository/es/setup/index/study_mapping.json

 {
-  "dynamic": "strict",
+  "dynamic": false,
   "properties": {
     "studyURI": {
       "type": "keyword"

backend/src/test/resources/fr/inra/urgi/faidare/repository/es/setup/index/trial_mapping.json

 {
-  "dynamic": "strict",
+  "dynamic": false,
   "properties": {
     "trialURI": {
       "type": "keyword"

scripts/harvest.sh

@@ -182,7 +182,7 @@ for DOCUMENT_TYPE in ${DOCUMENT_TYPES}; do
     # Check indexed data
     echo -e "* Check data indexed from ${DATA_DIR} into ${INDEX_NAME}..."
     	# skip some documents because they contain nested objects that distort the count
-    	if [[ "${DOCUMENT_TYPE}" != "germplasmAttribute" && "${DOCUMENT_TYPE}" != "trial" ]]; then
+    	if [[ "${DOCUMENT_TYPE}" != "germplasmAttribute" && "${DOCUMENT_TYPE}" != "trial" && "${DOCUMENT_TYPE}" != "xref" ]]; then
     		COUNT_EXTRACTED_DOCS=0
     		for FILE in $(find ${DATA_DIR} -name "${DOCUMENT_TYPE}-*.json.gz"); do
     			COUNT_FILE_DOCS=$(zcat ${FILE} | grep -o "\"@id\"" | wc -l)