Commits · bf61e93fb29df9a6a632abd1eaf0566faaa25a68 · umrf / ranomaly

01 Feb, 2021 1 commit

Fix ASVenn · bf61e93f

Etienne Rifa authored Feb 01, 2021

allow to plot up to 7 groups
+ venn table core and exclusive counts

bf61e93f

29 Jan, 2021 2 commits
- distinct robject output for relative abundances · 09f599ec
  Etienne Rifa authored Jan 29, 2021
  
  09f599ec
- mixedorder on bars_fun + misc · 617f6500
  Etienne Rifa authored Jan 29, 2021
  
  617f6500
06 Jan, 2021 1 commit
- fix link to DBs · 2daedc56
  Etienne Rifa authored Jan 06, 2021
  
  2daedc56
18 Dec, 2020 1 commit
- Resolving some warnings · 50d2372c
  Sebastien Theil authored Dec 18, 2020
  
  50d2372c
17 Dec, 2020 3 commits
- Merge branch 'master' of forgemia.inra.fr:umrf/ranomaly · a1824496
  Sebastien Theil authored Dec 17, 2020
  
  a1824496
- Create trim variables. · 49399d7e
  Sebastien Theil authored Dec 17, 2020
  
  49399d7e
- rare output update · 177fe7dd
  Etienne Rifa authored Dec 17, 2020
  
  177fe7dd
16 Dec, 2020 1 commit
- outputs update, asvenn debug for glom object · 685a5934
  Etienne Rifa authored Dec 16, 2020
  
  685a5934
14 Dec, 2020 1 commit
- update · ba3dc006
  Etienne Rifa authored Dec 14, 2020
  
  ba3dc006
10 Dec, 2020 1 commit
- fix trim argument in dada2_fun + beta div output · c8cf67c7
  Etienne Rifa authored Dec 10, 2020
  
  c8cf67c7
08 Dec, 2020 4 commits
- omitted fix · 2b4fe5b5
  Etienne Rifa authored Dec 08, 2020
  
  2b4fe5b5
- Merge branch 'master' of forgemia.inra.fr:umrf/ranomaly · 7c254eac
  Sebastien Theil authored Dec 08, 2020
  
  7c254eac
- Minor modifications · 0cf54fd9
  Sebastien Theil authored Dec 08, 2020
  
  0cf54fd9
- resolve outputs, alpha fix impossible test, DB add species rank in check function · 0e138c04
  Etienne Rifa authored Dec 08, 2020
  
  0e138c04
19 Nov, 2020 1 commit
- asvenn: VENNFUN outside asvenn_fun, allowing its use indepedently from asvenn_fun. · 3ba7a775
  Etienne Rifa authored Nov 19, 2020
```
bars: fix output
dada2_fun: small changes on torrent sop
beta_light: add first covariable as shape argument in ordination
```
  3ba7a775
30 Oct, 2020 1 commit
- add outputfiles to bars_fun + csv2phy allow create phyloseq obj without tree · f0caa936
  Rifa Etienne authored Oct 30, 2020
  
  f0caa936
16 Oct, 2020 2 commits
- Merge branch 'master' of forgemia.inra.fr:umrf/ranomaly into master · e24270a3
  Sebastien Theil authored Oct 16, 2020
  
  e24270a3
- Returns all the splitted objects in a list. · 82bd0aa7
  Sebastien Theil authored Oct 16, 2020
  
  82bd0aa7
07 Oct, 2020 2 commits
- use_case · 842c468f
  Rifa Etienne authored Oct 07, 2020
  
  842c468f
- update · 0fd10e9e
  Rifa Etienne authored Oct 07, 2020
  
  0fd10e9e
22 Sep, 2020 1 commit
- adjust dada2 for torrent data workflow · 20a4fb4b
  Rifa Etienne authored Sep 22, 2020
```
fix features names for specific cases
```
  20a4fb4b
21 Sep, 2020 1 commit
- minor fixes · a50ddb56
  Rifa Etienne authored Sep 21, 2020
  
  a50ddb56
18 Sep, 2020 1 commit
- add dada2 SOP for torrent single end data · a1e2140b
  Rifa Etienne authored Sep 18, 2020
```
and few improvements + doc update
```
  a1e2140b
14 Sep, 2020 4 commits
- debug rownames taxa table · 0c353772
  Rifa Etienne authored Sep 14, 2020
  
  0c353772
- Merge branch 'master' of https://forgemia.inra.fr/umrf/ranomaly · 25845237
  Rifa Etienne authored Sep 14, 2020
  
  25845237
- update use_case · 9f62f41a
  Sebastien Theil authored Sep 14, 2020
  
  9f62f41a
- Merge branch 'master' of https://forgemia.inra.fr/umrf/ranomaly · 60fd2948
  Rifa Etienne authored Sep 14, 2020
  
  60fd2948
11 Sep, 2020 2 commits
- fix asvenn table · d01cc00d
  Rifa Etienne authored Sep 11, 2020
  
  d01cc00d
- fix asvenn table · eda09b51
  Rifa Etienne authored Sep 11, 2020
  
  eda09b51
08 Sep, 2020 4 commits
- use case update · dac85dd7
  Rifa Etienne authored Sep 08, 2020
  
  dac85dd7
- use case update · 39e8ef85
  Rifa Etienne authored Sep 08, 2020
  
  39e8ef85
- use case update · 214d1fad
  Rifa Etienne authored Sep 08, 2020
  
  214d1fad
- use case update · 082c909d
  Rifa Etienne authored Sep 08, 2020
  
  082c909d
07 Sep, 2020 6 commits
- remove *.html from ignore · 1a6b4756
  Sebastien Theil authored Sep 07, 2020
  
  1a6b4756
- remove *.html from ignore · 021511f3
  Sebastien Theil authored Sep 07, 2020
  
  021511f3
- update metadata. · 229b2805
  Sebastien Theil authored Sep 07, 2020
  
  229b2805
- update metadata. · 9025975f
  Sebastien Theil authored Sep 07, 2020
  
  9025975f
- update metadata. · 5c505db1
  Sebastien Theil authored Sep 07, 2020
  
  5c505db1
- update metadata. · 110ed98f
  Sebastien Theil authored Sep 07, 2020
  
  110ed98f