diff --git a/DESCRIPTION b/DESCRIPTION index e44d263b756899fa08bb897728a03b4d932adbf1..0c8b603f40ba1e5af58fbc8e812b5a1865149be6 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -51,7 +51,7 @@ URL: https://www.bioconductor.org/packages/release/bioc/html/ViSEAGO.html, https://forgemia.inra.fr/UMR-BOA/ViSEAGO BugReports: https://forgemia.inra.fr/UMR-BOA/ViSEAGO/issues biocViews: Software, Annotation, GO, GeneSetEnrichment, MultipleComparison, Clustering, Visualization -RoxygenNote: 7.1.1 +RoxygenNote: 7.2.1 Collate: 'genomic_ressource.R' 'Bioconductor2GO.R' diff --git a/R/EntrezGene_orthologs.R b/R/EntrezGene_orthologs.R index a07abffe15db22fdf34dcd871f0b645a5998a8ad..2f616b6e843876eb1b8b9e96eca97e19e0cecaa1 100644 --- a/R/EntrezGene_orthologs.R +++ b/R/EntrezGene_orthologs.R @@ -28,12 +28,9 @@ EntrezGene_orthologs=function(){ destfile =temp ) - # uncompress - gunzip(temp) - # read the file gene_orthologs=fread( - sub("\\.gz","",temp), + temp, verbose=FALSE, showProgress=FALSE )