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Commit 54b0d5e3 authored by Facundo Muñoz's avatar Facundo Muñoz ®️
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update website

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docs/CONDUCT.html
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</button>
<span class="navbar-brand">
<a class="navbar-link" href="index.html">mapMCDA</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.4</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.6</span>
</span>
</div>
......@@ -99,12 +99,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/Cirad-ASTRE/mapMCDA">
<span class="fa fa-github fa-lg"></span>
</a>
</li>
</ul>
</div><!--/.nav-collapse -->
......
docs/LICENSE-text.html
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</button>
<span class="navbar-brand">
<a class="navbar-link" href="index.html">mapMCDA</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.4</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.6</span>
</span>
</div>
......@@ -99,12 +99,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/Cirad-ASTRE/mapMCDA">
<span class="fa fa-github fa-lg"></span>
</a>
</li>
</ul>
</div><!--/.nav-collapse -->
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docs/articles/cmr_cartography-rmd.html
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......@@ -31,7 +31,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mapMCDA</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.4</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.6</span>
</span>
</div>
......@@ -65,14 +65,7 @@
<a href="../news/index.html">Changelog</a>
</li>
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/Cirad-ASTRE/mapMCDA">
<span class="fa fa-github fa-lg"></span>
</a>
</li>
</ul>
<ul class="nav navbar-nav navbar-right"></ul>
</div>
<!--/.nav-collapse -->
</div>
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<h1>Collection and pre-processing of cartographic information for Cameroon</h1>
<h4 class="author">Facundo Muñoz</h4>
<h4 class="date">2019-04-04</h4>
<h4 class="date">2019-04-06</h4>
<small class="dont-index">Source: <a href="https://github.com/Cirad-ASTRE/mapMCDA/blob/master/vignettes/cmr_cartography-rmd.Rmd"><code>vignettes/cmr_cartography-rmd.Rmd</code></a></small>
<div class="hidden name"><code>cmr_cartography-rmd.Rmd</code></div>
</div>
......@@ -102,7 +95,7 @@
<span class="co">#&gt; Loading required package: sp</span>
<span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/library">require</a></span>(rgdal)
<span class="co">#&gt; Loading required package: rgdal</span>
<span class="co">#&gt; rgdal: version: 1.4-3, (SVN revision 828)</span>
<span class="co">#&gt; rgdal: version: 1.3-3, (SVN revision 759)</span>
<span class="co">#&gt; Geospatial Data Abstraction Library extensions to R successfully loaded</span>
<span class="co">#&gt; Loaded GDAL runtime: GDAL 2.1.3, released 2017/20/01</span>
<span class="co">#&gt; Path to GDAL shared files: /usr/share/gdal/2.1</span>
......@@ -113,7 +106,9 @@
<span class="cf">if</span>(<span class="op">!</span><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/library">require</a></span>(mapview, <span class="dt">quietly =</span> <span class="ot">TRUE</span>))
<span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/cat">cat</a></span>(<span class="st">"We suggest installing the pacakge mapview for interactive visualisation"</span>,
<span class="st">"of cartography from within R"</span>)</code></pre></div>
<span class="st">"of cartography from within R"</span>)
<span class="co">#&gt; Warning: replacing previous import 'gdalUtils::gdal_rasterize' by</span>
<span class="co">#&gt; 'sf::gdal_rasterize' when loading 'mapview'</span></code></pre></div>
<div id="administrative-borders" class="section level2">
<h2 class="hasAnchor">
<a href="#administrative-borders" class="anchor"></a>Administrative borders</h2>
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docs/articles/index.html
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</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mapMCDA</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.4</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.6</span>
</span>
</div>
......@@ -99,12 +99,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/Cirad-ASTRE/mapMCDA">
<span class="fa fa-github fa-lg"></span>
</a>
</li>
</ul>
</div><!--/.nav-collapse -->
......
docs/articles/mapMCDA.html
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......@@ -31,7 +31,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mapMCDA</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.4</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.6</span>
</span>
</div>
......@@ -65,14 +65,7 @@
<a href="../news/index.html">Changelog</a>
</li>
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/Cirad-ASTRE/mapMCDA">
<span class="fa fa-github fa-lg"></span>
</a>
</li>
</ul>
<ul class="nav navbar-nav navbar-right"></ul>
</div>
<!--/.nav-collapse -->
</div>
......@@ -86,9 +79,9 @@
<div class="page-header toc-ignore">
<h1>mapMCDA: aperçu du package</h1>
<h4 class="date">2019-04-04</h4>
<h4 class="date">2019-04-06</h4>
<small class="dont-index">Source: <a href="https://github.com/Cirad-ASTRE/mapMCDA/blob/master/vignettes/mapMCDA.Rmd"><code>vignettes/mapMCDA.Rmd</code></a></small>
<div class="hidden name"><code>mapMCDA.Rmd</code></div>
</div>
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docs/authors.html
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</button>
<span class="navbar-brand">
<a class="navbar-link" href="index.html">mapMCDA</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.4</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.6</span>
</span>
</div>
......@@ -99,12 +99,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/Cirad-ASTRE/mapMCDA">
<span class="fa fa-github fa-lg"></span>
</a>
</li>
</ul>
</div><!--/.nav-collapse -->
......
docs/index.html
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......@@ -33,7 +33,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="index.html">mapMCDA</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.4</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.6</span>
</span>
</div>
......@@ -67,14 +67,7 @@
<a href="news/index.html">Changelog</a>
</li>
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/Cirad-ASTRE/mapMCDA">
<span class="fa fa-github fa-lg"></span>
</a>
</li>
</ul>
<ul class="nav navbar-nav navbar-right"></ul>
</div>
<!--/.nav-collapse -->
</div>
......@@ -122,7 +115,6 @@
<div class="sourceCode"><pre class="sourceCode r"><code class="sourceCode r"><span class="cf">if</span> (<span class="op">!</span><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/library">require</a></span>(<span class="st">"remotes"</span>)) {
<span class="kw"><a href="https://www.rdocumentation.org/packages/utils/topics/install.packages">install.packages</a></span>(<span class="st">"remotes"</span>)
}
remotes<span class="op">::</span><span class="kw"><a href="https://www.rdocumentation.org/packages/remotes/topics/install_github">install_github</a></span>(<span class="st">"Cirad-ASTRE/geonetwork"</span>)
remotes<span class="op">::</span><span class="kw"><a href="https://www.rdocumentation.org/packages/remotes/topics/install_github">install_github</a></span>(<span class="st">"Cirad-ASTRE/mapMCDA"</span>)</code></pre></div>
<!-- # Resources -->
<!-- ## Vignettes -->
......@@ -146,8 +138,6 @@ remotes<span class="op">::</span><span class="kw"><a href="https://www.rdocument
<div class="links">
<h2>Links</h2>
<ul class="list-unstyled">
<li>Browse source code at <br><a href="https://github.com/Cirad-ASTRE/mapMCDA">https://​github.com/​Cirad-ASTRE/​mapMCDA</a>
</li>
<li>Report a bug at <br><a href="https://github.com/Cirad-ASTRE/mapMCDA/issues">https://​github.com/​Cirad-ASTRE/​mapMCDA/​issues</a>
</li>
</ul>
......
docs/news/index.html
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......@@ -63,7 +63,7 @@
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mapMCDA</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.4</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.6</span>
</span>
</div>
......@@ -99,12 +99,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/Cirad-ASTRE/mapMCDA">
<span class="fa fa-github fa-lg"></span>
</a>
</li>
</ul>
</div><!--/.nav-collapse -->
......@@ -118,16 +113,16 @@
<div class="col-md-9 contents">
<div class="page-header">
<h1>Changelog <small></small></h1>
<small>Source: <a href='https://github.com/Cirad-ASTRE/mapMCDA/blob/master/NEWS.md'><code>NEWS.md</code></a></small>
</div>
<div id="mapmcda-0-3-0" class="section level1">
<h1 class="page-header">
<a href="#mapmcda-0-3-0" class="anchor"></a>mapMCDA 0.3.0</h1>
<ul>
<li><p>Plot geographic networks (<a href='https://github.com/Cirad-ASTRE/mapMCDA/issues/13'>#13</a>)</p></li>
<li><p>Export CSV with units and risk categories (<a href='https://github.com/Cirad-ASTRE/mapMCDA/issues/10'>#10</a>)</p></li>
<li><p>Animal mobility data as a specific input type (<a href='https://github.com/Cirad-ASTRE/mapMCDA/issues/9'>#9</a>)</p></li>
<li><p>Plot geographic networks (#13)</p></li>
<li><p>Export CSV with units and risk categories (#10)</p></li>
<li><p>Animal mobility data as a specific input type (#9)</p></li>
</ul>
</div>
<div id="mapmcda-0-2-0" class="section level1">
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docs/reference/align_layers.html
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</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mapMCDA</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.4</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.6</span>
</span>
</div>
......@@ -101,12 +101,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/Cirad-ASTRE/mapMCDA">
<span class="fa fa-github fa-lg"></span>
</a>
</li>
</ul>
</div><!--/.nav-collapse -->
......@@ -120,7 +115,7 @@
<div class="col-md-9 contents">
<div class="page-header">
<h1>Harmonise projection, resolution and extent of a list of rasters</h1>
<small class="dont-index">Source: <a href='https://github.com/Cirad-ASTRE/mapMCDA/blob/master/R/wlc.R'><code>R/wlc.R</code></a></small>
<div class="hidden name"><code>align_layers.Rd</code></div>
</div>
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docs/reference/borders0.html
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</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mapMCDA</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.4</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.6</span>
</span>
</div>
......@@ -101,12 +101,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/Cirad-ASTRE/mapMCDA">
<span class="fa fa-github fa-lg"></span>
</a>
</li>
</ul>
</div><!--/.nav-collapse -->
......@@ -120,7 +115,7 @@
<div class="col-md-9 contents">
<div class="page-header">
<h1>Outer boundaries of a vector map</h1>
<small class="dont-index">Source: <a href='https://github.com/Cirad-ASTRE/mapMCDA/blob/master/R/borders0.R'><code>R/borders0.R</code></a></small>
<div class="hidden name"><code>borders0.Rd</code></div>
</div>
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docs/reference/compute_weights.html
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......@@ -67,7 +67,7 @@ Pairwise Comparison Method (Saaty 1987, Saaty 1996, Malczewski 1999)" />
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mapMCDA</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.4</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.6</span>
</span>
</div>
......@@ -103,12 +103,7 @@ Pairwise Comparison Method (Saaty 1987, Saaty 1996, Malczewski 1999)" />
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/Cirad-ASTRE/mapMCDA">
<span class="fa fa-github fa-lg"></span>
</a>
</li>
</ul>
</div><!--/.nav-collapse -->
......@@ -122,7 +117,7 @@ Pairwise Comparison Method (Saaty 1987, Saaty 1996, Malczewski 1999)" />
<div class="col-md-9 contents">
<div class="page-header">
<h1>Compute MCDA weights</h1>
<small class="dont-index">Source: <a href='https://github.com/Cirad-ASTRE/mapMCDA/blob/master/R/compute_weights.R'><code>R/compute_weights.R</code></a></small>
<div class="hidden name"><code>compute_weights.Rd</code></div>
</div>
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docs/reference/distance_map.html
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</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mapMCDA</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.4</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.6</span>
</span>
</div>
......@@ -101,12 +101,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/Cirad-ASTRE/mapMCDA">
<span class="fa fa-github fa-lg"></span>
</a>
</li>
</ul>
</div><!--/.nav-collapse -->
......@@ -120,7 +115,7 @@
<div class="col-md-9 contents">
<div class="page-header">
<h1>Compute a distance map to spatial features</h1>
<small class="dont-index">Source: <a href='https://github.com/Cirad-ASTRE/mapMCDA/blob/master/R/distance.R'><code>R/distance.R</code></a></small>
<div class="hidden name"><code>distance_map.Rd</code></div>
</div>
......@@ -142,7 +137,7 @@
</tr>
<tr>
<th>boundaries</th>
<td><p>SpatialPolygon* object with administrative
<td><p>SpatialPolygons* object with administrative
borders, or Raster* object from where to pick the resoltion.</p></td>
</tr>
<tr>
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docs/reference/distance_to_vector.html
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......@@ -66,7 +66,7 @@ within the limits of a given mask." />
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mapMCDA</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.4</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.6</span>
</span>
</div>
......@@ -102,12 +102,7 @@ within the limits of a given mask." />
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/Cirad-ASTRE/mapMCDA">
<span class="fa fa-github fa-lg"></span>
</a>
</li>
</ul>
</div><!--/.nav-collapse -->
......@@ -121,7 +116,7 @@ within the limits of a given mask." />
<div class="col-md-9 contents">
<div class="page-header">
<h1>Distance to vector features</h1>
<small class="dont-index">Source: <a href='https://github.com/Cirad-ASTRE/mapMCDA/blob/master/R/distance.R'><code>R/distance.R</code></a></small>
<div class="hidden name"><code>distance_to_vector.Rd</code></div>
</div>
......@@ -149,7 +144,8 @@ within the limits of a given mask.</p>
<h2 class="hasAnchor" id="value"><a class="anchor" href="#value"></a>Value</h2>
<p>Raster* object. Distance map in meters.</p>
<p>Raster* object. Distance map in meters (even for unprojected maps in
geographical coordinates).</p>
<h2 class="hasAnchor" id="details"><a class="anchor" href="#details"></a>Details</h2>
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docs/reference/download_country_admin.html
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</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mapMCDA</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.4</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.6</span>
</span>
</div>
......@@ -101,12 +101,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/Cirad-ASTRE/mapMCDA">
<span class="fa fa-github fa-lg"></span>
</a>
</li>
</ul>
</div><!--/.nav-collapse -->
......@@ -120,7 +115,7 @@
<div class="col-md-9 contents">
<div class="page-header">
<h1>Download Country Administrative Borders from GADM</h1>
<small class="dont-index">Source: <a href='https://github.com/Cirad-ASTRE/mapMCDA/blob/master/R/download_country_admin.R'><code>R/download_country_admin.R</code></a></small>
<div class="hidden name"><code>download_country_admin.Rd</code></div>
</div>
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docs/reference/epidemic_threshold.html
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</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mapMCDA</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.4</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.6</span>
</span>
</div>
......@@ -101,12 +101,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/Cirad-ASTRE/mapMCDA">
<span class="fa fa-github fa-lg"></span>
</a>
</li>
</ul>
</div><!--/.nav-collapse -->
......@@ -120,7 +115,7 @@
<div class="col-md-9 contents">
<div class="page-header">
<h1>Compute the Epidemic Threshold of a graph</h1>
<small class="dont-index">Source: <a href='https://github.com/Cirad-ASTRE/mapMCDA/blob/master/R/network.R'><code>R/network.R</code></a></small>
<div class="hidden name"><code>epidemic_threshold.Rd</code></div>
</div>
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docs/reference/index.html
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</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mapMCDA</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.4</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.6</span>
</span>
</div>
......@@ -99,12 +99,7 @@
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/Cirad-ASTRE/mapMCDA">
<span class="fa fa-github fa-lg"></span>
</a>
</li>
</ul>
</div><!--/.nav-collapse -->
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docs/reference/is.reciprocal.html
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......@@ -67,7 +67,7 @@ is 1 for all its elements." />
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mapMCDA</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.4</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.6</span>
</span>
</div>
......@@ -103,12 +103,7 @@ is 1 for all its elements." />
</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/Cirad-ASTRE/mapMCDA">
<span class="fa fa-github fa-lg"></span>
</a>
</li>
</ul>
</div><!--/.nav-collapse -->
......@@ -122,7 +117,7 @@ is 1 for all its elements." />
<div class="col-md-9 contents">
<div class="page-header">
<h1>Check reciprocal matrix</h1>
<small class="dont-index">Source: <a href='https://github.com/Cirad-ASTRE/mapMCDA/blob/master/R/is.reciprocal.R'><code>R/is.reciprocal.R</code></a></small>
<div class="hidden name"><code>is.reciprocal.Rd</code></div>
</div>
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docs/reference/layer_type.html
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</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">mapMCDA</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.4</span>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.6</span>
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</div>
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</ul>
<ul class="nav navbar-nav navbar-right">
<li>
<a href="https://github.com/Cirad-ASTRE/mapMCDA">
<span class="fa fa-github fa-lg"></span>
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</ul>
</div><!--/.nav-collapse -->
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<div class="col-md-9 contents">
<div class="page-header">
<h1>Detect type of geographic information</h1>
<small class="dont-index">Source: <a href='https://github.com/Cirad-ASTRE/mapMCDA/blob/master/R/layer_type.R'><code>R/layer_type.R</code></a></small>
<div class="hidden name"><code>layer_type.Rd</code></div>
</div>
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