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        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.8</span>
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      <h1>Reference</h1>
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    <colgroup>
      
      <col class="alias" />
      <col class="title" />
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    <tbody>
      <tr>
        <th colspan="2">
          <h2 id="section-all-functions" class="hasAnchor"><a href="#section-all-functions" class="anchor"></a>All functions</h2>
          <p class="section-desc"></p>
        </th>
      </tr>
      <tr>
        
        <td>
          <p><code><a href="align_layers.html">align_layers()</a></code> </p>
        </td>
        <td><p>Harmonise projection, resolution and extent of a list of rasters</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="borders0.html">borders0()</a></code> </p>
        </td>
        <td><p>Outer boundaries of a vector map</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="compute_weights.html">compute_weights()</a></code> </p>
        </td>
        <td><p>Compute MCDA weights</p></td>
      </tr><tr>
        
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        <td>
          <p><code><a href="csv_sep.html">csv_sep()</a></code> </p>
        </td>
        <td><p>Detection of separator in csv files</p></td>
      </tr><tr>
        
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        <td>
          <p><code><a href="distance_map.html">distance_map()</a></code> </p>
        </td>
        <td><p>Compute a distance map to spatial features</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="distance_to_vector.html">distance_to_vector()</a></code> </p>
        </td>
        <td><p>Distance to vector features</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="download_country_admin.html">download_country_admin()</a></code> </p>
        </td>
        <td><p>Download Country Administrative Borders from GADM</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="epidemic_threshold.html">epidemic_threshold()</a></code> </p>
        </td>
        <td><p>Compute the Epidemic Threshold of a graph</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="is.reciprocal.html">is.reciprocal()</a></code> </p>
        </td>
        <td><p>Check reciprocal matrix</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="layer_type.html">layer_type()</a></code> </p>
        </td>
        <td><p>Detect type of geographic information</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="load_dir.html">load_dir()</a></code> </p>
        </td>
        <td><p>Load all layers within a directory</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="load_layer.html">load_layer()</a></code> </p>
        </td>
        <td><p>Load a map layer</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="mapMCDA.html">mapMCDA</a></code> </p>
        </td>
        <td><p>mapMCDA</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="mapMCDA_app.html">mapMCDA_app()</a></code> </p>
        </td>
        <td><p>mapMCDA Shiny web interface</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="mapMCDA_datasets.html">mapMCDA_datasets()</a></code> </p>
        </td>
        <td><p>Load packaged Cameroon layers into memory</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="rasterize_geonetwork.html">rasterize(<i>&lt;geonetwork&gt;</i>,<i>&lt;Raster&gt;</i>)</a></code> <code><a href="rasterize_geonetwork.html">rasterize(<i>&lt;geonetwork&gt;</i>,<i>&lt;SpatialPolygons&gt;</i>)</a></code> </p>
        </td>
        <td><p>Rasterize a geographic network</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="read_network.html">read_network()</a></code> </p>
        </td>
        <td><p>Read and interpret network data</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="resolution.html">resolution()</a></code> </p>
        </td>
        <td><p>Compute a suitable resolution for a map</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="risk_layer.html">risk_layer()</a></code> </p>
        </td>
        <td><p>Compute risk layer</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="risk_plot.html">risk_plot()</a></code> </p>
        </td>
        <td><p>Produce final plot of risk</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="risk_table.html">risk_table()</a></code> </p>
        </td>
        <td><p>Produce final table of risk levels by epidemiological unit</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="risk_unit.html">risk_unit()</a></code> </p>
        </td>
        <td><p>Risk by epidemiological unit</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="rmext.html">rmext()</a></code> </p>
        </td>
        <td><p>Remove filename extension</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="voronoi.html">voronoi()</a></code> </p>
        </td>
        <td><p>Voronoi polygons</p></td>
      </tr><tr>
        
        <td>
          <p><code><a href="wlc.html">wlc()</a></code> </p>
        </td>
        <td><p>Weighted Linear Combination of risk factors</p></td>
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      <li><a href="#section-all-functions">All functions</a></li>
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