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<title>Produce an epidemiological risk map by weighting multiple risk factors • mapMCDA</title>
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<meta property="og:description" content="Use a Shiny interface to help users import multiple layers of risk
  factors, scale and combine them using a Multi-Criteria Decision Analysis
  approach to produce a risk map as an outcome.">
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        <span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">0.3.8</span>
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<div id="mapmcda" class="section level1">
<div class="page-header"><h1 class="hasAnchor">
<a href="#mapmcda" class="anchor"></a>mapMCDA <img src="reference/figures/logo.png" align="right">
</h1></div>
<div class="figure">
<img src="reference/figures/mapMCDA_overview.png">
</div>
<p><code>mapMCDA</code> helps producing <strong>risk maps</strong> by weighting <strong>risk factors</strong> using <strong>expert knowledge</strong>.</p>
<p>The typical use case is the lack of (reliable) data about the epidemics of a disease, but available information about well known <strong>risk factors</strong> (e.g. animal density, proximity to border, proximity to water courses, etc.).</p>
<p>In order to design a <strong>stratified sampling</strong> or a <strong>surveillance campaign</strong>, a preliminar risk map based on expert judgement is required.</p>
<p>This package (and method) provides a systematic and guided approach to build such maps.</p>
<div class="figure">
<img src="reference/figures/plot-risk-unit-1.png">
</div>
<p>The package include a Graphical User Interface (Shiny) that helps in processing and weighting risk factors.</p>
<div class="sourceCode"><pre class="sourceCode r"><code class="sourceCode r"><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/library">library</a></span>(mapMCDA)
<span class="kw"><a href="reference/mapMCDA_app.html">mapMCDA_app</a></span>()</code></pre></div>
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<img src="reference/figures/interface.png">
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<div id="installing-the-package" class="section level2">
<h2 class="hasAnchor">
<a href="#installing-the-package" class="anchor"></a>Installing the package</h2>
<p><code>mapMCDA</code> is on its way to CRAN. In the meanwhile, install from GitHub as follows.</p>
<!-- To install the current stable, CRAN version of the package, type: -->
<!-- ```{r install, eval = FALSE} -->
<!-- install.packages("mapMCDA") -->
<!-- ``` -->
<!-- To benefit from the latest features and bug fixes, install the development, *github* version of the package using: -->
<div class="sourceCode"><pre class="sourceCode r"><code class="sourceCode r"><span class="cf">if</span> (<span class="op">!</span><span class="kw"><a href="https://www.rdocumentation.org/packages/base/topics/library">require</a></span>(<span class="st">"remotes"</span>)) {
  <span class="kw"><a href="https://www.rdocumentation.org/packages/utils/topics/install.packages">install.packages</a></span>(<span class="st">"remotes"</span>)
}
remotes<span class="op">::</span><span class="kw"><a href="https://www.rdocumentation.org/packages/remotes/topics/install_github">install_github</a></span>(<span class="st">"Cirad-ASTRE/mapMCDA"</span>)</code></pre></div>
<!-- # Resources -->
<!-- ## Vignettes -->
<!-- An overview and examples of *mapMCDA* are provided in the vignettes: -->
<!-- ... -->
<!-- ## Websites -->
<!-- The following websites are available: -->
<!-- ... -->
</div>
<div id="getting-help-online" class="section level2">
<h2 class="hasAnchor">
<a href="#getting-help-online" class="anchor"></a>Getting help online</h2>
<p>Bug reports and feature requests should be posted on <em>github</em> using the <a href="http://github.com/Cirad-ASTRE/mapMCDA/issues"><em>issue</em></a> system.</p>
<p>Contributions are welcome via <strong>pull requests</strong>.</p>
<p>Please note that this project is released with a <a href="CONDUCT.html">Contributor Code of Conduct</a>. By participating in this project you agree to abide by its terms.</p>
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<h2>Links</h2>
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<li>Report a bug at <br><a href="https://github.com/Cirad-ASTRE/mapMCDA/issues">https://​github.com/​Cirad-ASTRE/​mapMCDA/​issues</a>
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<h2>License</h2>
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<a href="https://www.r-project.org/Licenses/GPL-3">GPL-3</a> + file <a href="LICENSE-text.html">LICENSE</a>
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<h2>Developers</h2>
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<li>Sylvain Falala <br><small class="roles"> Author </small>  <br><small>(Shiny interface)</small>
</li>
<li>Facundo Muñoz <br><small class="roles"> Author, maintainer </small> <a href="https://orcid.org/0000-0002-5061-4241" target="orcid.widget"><img src="https://members.orcid.org/sites/default/files/vector_iD_icon.svg" class="orcid" alt="ORCID" height="16"></a> <br><small>(Package developer)</small>
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