inra-eugene_3.3-1_i386.build 80 KB
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dpkg-buildpackage: source package is inra-eugene
dpkg-buildpackage: source version is 3.3-1
dpkg-buildpackage: source changed by Marie-Josee Cros <cros@ossau.toulouse.inra.fr>
dpkg-buildpackage: host architecture i386
 fakeroot debian/rules clean
dh_testdir
dh_testroot
rm -f build-stamp 
# Add here commands to clean up after the build process.
/usr/bin/make distclean
make[1]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
make[1]: *** No rule to make target `distclean'.  Stop.
make[1]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
make: [clean] Error 2 (ignored)
cp -f /usr/share/misc/config.sub config.sub
cp -f /usr/share/misc/config.guess config.guess
dh_clean 
dh_clean: Compatibility levels before 3 are deprecated.
 dpkg-source -b inra-eugene-3.3
dpkg-source: building inra-eugene in inra-eugene_3.3.orig.tar.gz
dpkg-source: building inra-eugene in inra-eugene_3.3-1.diff.gz
dpkg-source: building inra-eugene in inra-eugene_3.3-1.dsc
 debian/rules build
dh_testdir
# Add here commands to configure the package.
./configure --host=i486-linux-gnu --build=i486-linux-gnu --prefix=/usr --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking whether make sets $(MAKE)... yes
checking for working aclocal-1.4... found
checking for working autoconf... found
checking for working automake-1.4... found
checking for working autoheader... found
checking for working makeinfo... found
checking for i486-linux-gnu-g++... no
checking for i486-linux-gnu-c++... no
checking for i486-linux-gnu-gpp... no
checking for i486-linux-gnu-aCC... no
checking for i486-linux-gnu-CC... no
checking for i486-linux-gnu-cxx... no
checking for i486-linux-gnu-cc++... no
checking for i486-linux-gnu-cl... no
checking for i486-linux-gnu-FCC... no
checking for i486-linux-gnu-KCC... no
checking for i486-linux-gnu-RCC... no
checking for i486-linux-gnu-xlC_r... no
checking for i486-linux-gnu-xlC... no
checking for g++... g++
checking for C++ compiler default output file name... a.out
checking whether the C++ compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking for i486-linux-gnu-gcc... no
checking for gcc... gcc
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for flex... flex
checking for flex... (cached) flex
checking for yywrap in -lfl... yes
checking lex output file root... lex.yy
checking whether yytext is a pointer... yes
checking for bison... bison -y
checking for gawk... no
checking for mawk... mawk
checking whether ln -s works... yes
checking for i486-linux-gnu-ranlib... no
checking for ranlib... ranlib
checking for main in -lc... yes
checking for main in -ldl... yes
checking for main in -lgcc... yes
checking for main in -lgd... yes
checking for main in -lm... yes
checking for main in -lpng... yes
checking for main in -lz... yes
checking how to run the C preprocessor... gcc -E
checking for egrep... grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for strings.h... (cached) yes
checking for unistd.h... (cached) yes
checking values.h usability... yes
checking values.h presence... yes
checking for values.h... yes
checking getopt.h usability... yes
checking getopt.h presence... yes
checking for getopt.h... yes
checking for an ANSI C-conforming const... yes
checking for inline... inline
checking whether struct tm is in sys/time.h or time.h... time.h
checking for size_t... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking whether lstat dereferences a symlink specified with a trailing slash... yes
checking whether stat accepts an empty string... no
checking for floor... yes
checking for pow... yes
checking for sqrt... yes
checking for strchr... yes
checking for strspn... yes
checking for uname... yes
checking for getopt... yes
configure: creating ./config.status
config.status: creating Makefile
config.status: creating README
config.status: creating src/Makefile
config.status: creating src/GDIF/Makefile
config.status: creating src/Parametrization/Makefile
config.status: creating src/SensorPlugins/Makefile
config.status: creating src/SensorPlugins/0_SensorTk/Makefile
config.status: creating src/SensorPlugins/0_SensorTk/GetData/Makefile
config.status: creating src/SensorPlugins/AnnotaStruct/Makefile
config.status: creating src/SensorPlugins/ATGpr/Makefile
config.status: creating src/SensorPlugins/BlastX/Makefile
config.status: creating src/SensorPlugins/Est/Makefile
config.status: creating src/SensorPlugins/EuStop/Makefile
config.status: creating src/SensorPlugins/FrameShift/Makefile
config.status: creating src/SensorPlugins/GCPlot/Makefile
config.status: creating src/SensorPlugins/GFF/Makefile
config.status: creating src/SensorPlugins/GSplicer/Makefile
config.status: creating src/SensorPlugins/Homology/Makefile
config.status: creating src/SensorPlugins/IfElse/Makefile
config.status: creating src/SensorPlugins/MarkovConst/Makefile
config.status: creating src/SensorPlugins/MarkovIMM/Makefile
config.status: creating src/SensorPlugins/MarkovIMM/GetData/Makefile
config.status: creating src/SensorPlugins/MarkovProt/Makefile
config.status: creating src/SensorPlugins/MarkovProt/GetData/Makefile
config.status: creating src/SensorPlugins/NG2/Makefile
config.status: creating src/SensorPlugins/NStart/Makefile
config.status: creating src/SensorPlugins/PatConst/Makefile
config.status: creating src/SensorPlugins/PepSignal/Makefile
config.status: creating src/SensorPlugins/Plotter/Makefile
config.status: creating src/SensorPlugins/Repeat/Makefile
config.status: creating src/SensorPlugins/Riken/Makefile
config.status: creating src/SensorPlugins/SMachine/Makefile
config.status: creating src/SensorPlugins/SPred/Makefile
config.status: creating src/SensorPlugins/SpliceWAM/Makefile
config.status: creating src/SensorPlugins/StartWAM/Makefile
config.status: creating src/SensorPlugins/Tester/Makefile
config.status: creating src/SensorPlugins/Transcript/Makefile
config.status: creating src/SensorPlugins/User/Makefile
config.status: creating plugins/Makefile
config.status: creating doc/Makefile
config.status: creating config.h
config.status: executing default-1 commands
dh_testdir
# Add here commands to compile the package.
/usr/bin/make
make[1]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
cd . \
  && CONFIG_FILES=Makefile CONFIG_HEADERS= /bin/sh ./config.status
config.status: creating Makefile
config.status: executing default-1 commands
make[1]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
make[1]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
/usr/bin/make  all-recursive
make[2]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
Making all in src
make[3]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src'
cd .. \
  && CONFIG_FILES=src/Makefile CONFIG_HEADERS= /bin/sh ./config.status
config.status: creating src/Makefile
config.status: executing default-1 commands
make[3]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src'
make[3]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src'
Making all in Parametrization
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/Parametrization'
cd ../.. \
  && CONFIG_FILES=src/Parametrization/Makefile CONFIG_HEADERS= /bin/sh ./config.status
config.status: creating src/Parametrization/Makefile
config.status: executing default-1 commands
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/Parametrization'
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/Parametrization'
g++ -DHAVE_CONFIG_H -I. -I. -I../..    -rdynamic -fPIC  -c ParaOptimization.cc
g++ -DHAVE_CONFIG_H -I. -I. -I../..    -rdynamic -fPIC  -c OptiAlgorithm.cc
g++ -DHAVE_CONFIG_H -I. -I. -I../..    -rdynamic -fPIC  -c Random.cc
g++ -DHAVE_CONFIG_H -I. -I. -I../..    -rdynamic -fPIC  -c LineSearch.cc
g++ -DHAVE_CONFIG_H -I. -I. -I../..    -rdynamic -fPIC  -c Genetic.cc
g++ -DHAVE_CONFIG_H -I. -I. -I../..    -rdynamic -fPIC  -c CrossingOver.cc
g++ -DHAVE_CONFIG_H -I. -I. -I../..    -rdynamic -fPIC  -c Mutating.cc
g++ -DHAVE_CONFIG_H -I. -I. -I../..    -rdynamic -fPIC  -c Scaling.cc
g++ -DHAVE_CONFIG_H -I. -I. -I../..    -rdynamic -fPIC  -c Selecting.cc
g++ -DHAVE_CONFIG_H -I. -I. -I../..    -rdynamic -fPIC  -c Sharing.cc
g++ -DHAVE_CONFIG_H -I. -I. -I../..    -rdynamic -fPIC  -c SimulatedAnnealing.cc
g++ -DHAVE_CONFIG_H -I. -I. -I../..    -rdynamic -fPIC  -c Chromosome.cc
rm -f libParametrization.a
ar cru libParametrization.a ParaOptimization.o OptiAlgorithm.o Random.o LineSearch.o Genetic.o CrossingOver.o Mutating.o Scaling.o Selecting.o Sharing.o SimulatedAnnealing.o Chromosome.o 
ranlib libParametrization.a
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/Parametrization'
Making all in GDIF
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/GDIF'
cd ../.. \
  && CONFIG_FILES=src/GDIF/Makefile CONFIG_HEADERS= /bin/sh ./config.status
config.status: creating src/GDIF/Makefile
config.status: executing default-1 commands
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/GDIF'
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/GDIF'
gcc -DHAVE_CONFIG_H -I. -I. -I../..      -c gdIF.c
rm -f libGDIF.a
ar cru libGDIF.a gdIF.o 
ranlib libGDIF.a
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/GDIF'
Making all in .
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src'
g++ -DHAVE_CONFIG_H -I. -I. -I..    -rdynamic -fPIC -DDEFAULT_EUGENE_DIR=\"/usr/share/eugene\"  -c EuGene.cc
g++ -DHAVE_CONFIG_H -I. -I. -I..    -rdynamic -fPIC -DDEFAULT_EUGENE_DIR=\"/usr/share/eugene\"  -c DAG.cc
g++ -DHAVE_CONFIG_H -I. -I. -I..    -rdynamic -fPIC -DDEFAULT_EUGENE_DIR=\"/usr/share/eugene\"  -c Hits.cc
g++ -DHAVE_CONFIG_H -I. -I. -I..    -rdynamic -fPIC -DDEFAULT_EUGENE_DIR=\"/usr/share/eugene\"  -c DNASeq.cc
g++ -DHAVE_CONFIG_H -I. -I. -I..    -rdynamic -fPIC -DDEFAULT_EUGENE_DIR=\"/usr/share/eugene\"  -c System.cc
g++ -DHAVE_CONFIG_H -I. -I. -I..    -rdynamic -fPIC -DDEFAULT_EUGENE_DIR=\"/usr/share/eugene\"  -c Prediction.cc
g++ -DHAVE_CONFIG_H -I. -I. -I..    -rdynamic -fPIC -DDEFAULT_EUGENE_DIR=\"/usr/share/eugene\"  -c BackP.cc
g++ -DHAVE_CONFIG_H -I. -I. -I..    -rdynamic -fPIC -DDEFAULT_EUGENE_DIR=\"/usr/share/eugene\"  -c Sensor.cc
g++ -DHAVE_CONFIG_H -I. -I. -I..    -rdynamic -fPIC -DDEFAULT_EUGENE_DIR=\"/usr/share/eugene\"  -c Dll.cc
g++ -DHAVE_CONFIG_H -I. -I. -I..    -rdynamic -fPIC -DDEFAULT_EUGENE_DIR=\"/usr/share/eugene\"  -c MSensor.cc
g++ -DHAVE_CONFIG_H -I. -I. -I..    -rdynamic -fPIC -DDEFAULT_EUGENE_DIR=\"/usr/share/eugene\"  -c Param.cc
g++ -DHAVE_CONFIG_H -I. -I. -I..    -rdynamic -fPIC -DDEFAULT_EUGENE_DIR=\"/usr/share/eugene\"  -c PenaltyDist.cc
g++ -DHAVE_CONFIG_H -I. -I. -I..    -rdynamic -fPIC -DDEFAULT_EUGENE_DIR=\"/usr/share/eugene\"  -c AltEst.cc
g++ -rdynamic -fPIC -DDEFAULT_EUGENE_DIR=\"/usr/share/eugene\"   -o eugene  EuGene.o DAG.o Hits.o DNASeq.o System.o Prediction.o BackP.o Sensor.o Dll.o MSensor.o Param.o PenaltyDist.o AltEst.o Parametrization/libParametrization.a  GDIF/libGDIF.a -ldl -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src'
Making all in SensorPlugins
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins'
cd ../.. \
  && CONFIG_FILES=src/SensorPlugins/Makefile CONFIG_HEADERS= /bin/sh ./config.status
config.status: creating src/SensorPlugins/Makefile
config.status: executing default-1 commands
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins'
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins'
Making all in 0_SensorTk
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk'
cd ../../.. \
  && CONFIG_FILES=src/SensorPlugins/0_SensorTk/Makefile CONFIG_HEADERS= /bin/sh ./config.status
config.status: creating src/SensorPlugins/0_SensorTk/Makefile
config.status: executing default-1 commands
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk'
Making all in GetData
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk/GetData'
cd ../../../.. \
  && CONFIG_FILES=src/SensorPlugins/0_SensorTk/GetData/Makefile CONFIG_HEADERS= /bin/sh ./config.status
config.status: creating src/SensorPlugins/0_SensorTk/GetData/Makefile
config.status: executing default-1 commands
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk/GetData'
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk/GetData'
g++ -DHAVE_CONFIG_H -I. -I. -I../../../..      -c WAMbuilder.cc
../markov.cc: In member function `void TabChaine<CHAINE, 
   T>::compte2probas(const TabChaine<CHAINE, int>*, int) [with CHAINE = 
   ChaineADN, T = short unsigned int]':
WAMbuilder.cc:122:   instantiated from here
../markov.cc:615: warning: converting to `short unsigned int' from `double'
WAMbuilder.cc:122:   instantiated from here
../markov.cc:641: warning: converting to `short unsigned int' from `double'
g++    -o egn_WAMbuilder  WAMbuilder.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk/GetData'
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c BStrArray.cc
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c WAM.cc
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c markov.cc
rm -f libSensorTk.a
ar cru libSensorTk.a BStrArray.o WAM.o markov.o 
ranlib libSensorTk.a
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk'
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk'
Making all in AnnotaStruct
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/AnnotaStruct'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.AnnotaStruct.cc
g++ -rdynamic -fPIC   -o Sensor.AnnotaStruct.so -shared   Sensor.AnnotaStruct.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/AnnotaStruct'
Making all in ATGpr
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/ATGpr'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.ATGpr.cc
g++ -rdynamic -fPIC   -o Sensor.ATGpr.so -shared  Sensor.ATGpr.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/ATGpr'
Making all in BlastX
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/BlastX'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.BlastX.cc
g++ -rdynamic -fPIC   -o Sensor.BlastX.so -shared  Sensor.BlastX.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/BlastX'
Making all in Est
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Est'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.Est.cc
g++ -rdynamic -fPIC   -o Sensor.Est.so -shared  Sensor.Est.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Est'
Making all in EuStop
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/EuStop'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.EuStop.cc
g++ -rdynamic -fPIC   -o Sensor.EuStop.so -shared  Sensor.EuStop.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/EuStop'
Making all in FrameShift
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/FrameShift'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.FrameShift.cc
g++ -rdynamic -fPIC   -o Sensor.FrameShift.so -shared  Sensor.FrameShift.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/FrameShift'
Making all in GCPlot
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GCPlot'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.GCPlot.cc
g++ -rdynamic -fPIC   -o Sensor.GCPlot.so -shared  Sensor.GCPlot.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GCPlot'
Making all in GFF
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GFF'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.GFF.cc
g++ -rdynamic -fPIC   -o Sensor.GFF.so -shared  Sensor.GFF.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GFF'
Making all in GSplicer
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GSplicer'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.GSplicer.cc
g++ -rdynamic -fPIC   -o Sensor.GSplicer.so -shared  Sensor.GSplicer.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GSplicer'
Making all in Homology
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Homology'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.Homology.cc
g++ -rdynamic -fPIC   -o Sensor.Homology.so -shared  Sensor.Homology.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Homology'
Making all in IfElse
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/IfElse'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.IfElse.cc
g++ -rdynamic -fPIC   -o Sensor.IfElse.so -shared   Sensor.IfElse.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/IfElse'
Making all in MarkovConst
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovConst'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.MarkovConst.cc
g++ -rdynamic -fPIC   -o Sensor.MarkovConst.so -shared   Sensor.MarkovConst.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovConst'
Making all in MarkovIMM
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM'
Making all in GetData
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM/GetData'
g++ -DHAVE_CONFIG_H -I. -I. -I../../../..      -c TrainIMM.cc
g++    -o egn_TrainIMM  TrainIMM.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM/GetData'
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.MarkovIMM.cc
g++ -rdynamic -fPIC   -o Sensor.MarkovIMM.so -shared   Sensor.MarkovIMM.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM'
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM'
Making all in MarkovProt
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt'
Making all in GetData
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt/GetData'
g++ -DHAVE_CONFIG_H -I. -I. -I../../../..      -c buildMarkovProt.cc
../../0_SensorTk/markov.cc: In member function `void TabChaine<CHAINE, 
   T>::compte2probas(const TabChaine<CHAINE, int>*, int) [with CHAINE = 
   ChainePROT21, T = short unsigned int]':
buildMarkovProt.cc:78:   instantiated from here
../../0_SensorTk/markov.cc:615: warning: converting to `short unsigned int' 
   from `double'
buildMarkovProt.cc:78:   instantiated from here
../../0_SensorTk/markov.cc:641: warning: converting to `short unsigned int' 
   from `double'
g++    -o egn_buildMarkovProt  buildMarkovProt.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt/GetData'
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.MarkovProt.cc
g++ -rdynamic -fPIC   -o Sensor.MarkovProt.so -shared   Sensor.MarkovProt.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt'
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt'
Making all in NG2
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NG2'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.NG2.cc
g++ -rdynamic -fPIC   -o Sensor.NG2.so -shared   Sensor.NG2.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NG2'
Making all in NStart
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NStart'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.NStart.cc
g++ -rdynamic -fPIC   -o Sensor.NStart.so -shared   Sensor.NStart.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NStart'
Making all in PatConst
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/PatConst'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.PatConst.cc
g++ -rdynamic -fPIC   -o Sensor.PatConst.so -shared   Sensor.PatConst.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/PatConst'
Making all in PepSignal
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/PepSignal'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.PepSignal.cc
g++ -rdynamic -fPIC   -o Sensor.PepSignal.so -shared   Sensor.PepSignal.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/PepSignal'
Making all in Plotter
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Plotter'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.Plotter.cc
g++ -rdynamic -fPIC   -o Sensor.Plotter.so -shared   Sensor.Plotter.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Plotter'
Making all in Repeat
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Repeat'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.Repeat.cc
g++ -rdynamic -fPIC   -o Sensor.Repeat.so -shared   Sensor.Repeat.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Repeat'
Making all in Riken
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Riken'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.Riken.cc
g++ -rdynamic -fPIC   -o Sensor.Riken.so -shared   Sensor.Riken.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Riken'
Making all in SMachine
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/SMachine'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.SMachine.cc
g++ -rdynamic -fPIC   -o Sensor.SMachine.so -shared   Sensor.SMachine.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/SMachine'
Making all in SPred
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/SPred'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.SPred.cc
g++ -rdynamic -fPIC   -o Sensor.SPred.so -shared   Sensor.SPred.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/SPred'
Making all in SpliceWAM
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/SpliceWAM'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.SpliceWAM.cc
g++ -rdynamic -fPIC   -o Sensor.SpliceWAM.so -shared   Sensor.SpliceWAM.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/SpliceWAM'
Making all in StartWAM
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/StartWAM'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.StartWAM.cc
g++ -rdynamic -fPIC   -o Sensor.StartWAM.so -shared   Sensor.StartWAM.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/StartWAM'
Making all in Tester
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Tester'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.Tester.cc
g++ -rdynamic -fPIC   -o Sensor.Tester.so -shared   Sensor.Tester.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Tester'
Making all in Transcript
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Transcript'
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.Transcript.cc
g++ -rdynamic -fPIC   -o Sensor.Transcript.so -shared   Sensor.Transcript.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Transcript'
Making all in User
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/User'
bison -y -d  yacc.y && mv y.tab.c yacc.c
if test -f y.tab.h; then \
if cmp -s y.tab.h yacc.h; then rm -f y.tab.h; else mv y.tab.h yacc.h; fi; \
else :; fi
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -fPIC  -c yacc.c
flex   lex.l && mv lex.yy.c lex.c
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -fPIC  -c lex.c
g++ -DHAVE_CONFIG_H -I. -I. -I../../..    -rdynamic -fPIC  -c Sensor.User.cc
g++ -rdynamic -fPIC   -o Sensor.User.so -shared  yacc.o lex.o Sensor.User.o  -lz -lpng -lm -lgd -lgcc -ldl -lc 
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/User'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins'
make[5]: Nothing to be done for `all-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins'
make[3]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src'
Making all in plugins
make[3]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/plugins'
cp -f ../src/SensorPlugins/*/*.so .
make[3]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/plugins'
Making all in doc
make[3]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/doc'
make[3]: Nothing to be done for `all'.
make[3]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/doc'
make[3]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
make[3]: Nothing to be done for `all-am'.
make[3]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
make[2]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
make[1]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
docbook-to-man debian/eugene.sgml |gzip -9 > debian/eugene.1.gz
docbook-to-man debian/egn_TrainIMM.sgml |gzip -9  > debian/egn_TrainIMM.1.gz
docbook-to-man debian/egn_WAMbuilder.sgml |gzip -9 > debian/egn_WAMbuilder.1.gz
docbook-to-man debian/egn_buildMarkovProt.sgml |gzip -9 > debian/egn_buildMarkovProt.1.gz
touch build-stamp
 fakeroot debian/rules binary
dh_testdir
dh_testroot
dh_clean -k 
dh_clean: Compatibility levels before 3 are deprecated.
dh_installdirs
dh_installdirs: Compatibility levels before 3 are deprecated.
# Add here commands to install the package into debian/inra-eugene.
/usr/bin/make install DESTDIR=/home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene
make[1]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
Making install in src
make[2]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src'
Making install in Parametrization
make[3]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/Parametrization'
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/Parametrization'
make[4]: Nothing to be done for `install-exec-am'.
make[4]: Nothing to be done for `install-data-am'.
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/Parametrization'
make[3]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/Parametrization'
Making install in GDIF
make[3]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/GDIF'
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/GDIF'
make[4]: Nothing to be done for `install-exec-am'.
make[4]: Nothing to be done for `install-data-am'.
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/GDIF'
make[3]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/GDIF'
Making install in .
make[3]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src'
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src'
/bin/sh ../config/mkinstalldirs /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene/usr/bin
mkdir /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene
mkdir /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene/usr
mkdir /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene/usr/bin
  /usr/bin/install -c  eugene /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene/usr/bin/eugene
make[4]: Nothing to be done for `install-data-am'.
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src'
make[3]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src'
Making install in SensorPlugins
make[3]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins'
Making install in 0_SensorTk
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk'
Making install in GetData
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk/GetData'
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk/GetData'
/bin/sh ../../../../config/mkinstalldirs /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene/usr/bin
  /usr/bin/install -c  egn_WAMbuilder /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene/usr/bin/egn_WAMbuilder
make[6]: Nothing to be done for `install-data-am'.
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk/GetData'
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk/GetData'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk'
rm -f libSensorTk.a
ar cru libSensorTk.a BStrArray.o WAM.o markov.o 
ranlib libSensorTk.a
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk'
make[6]: Nothing to be done for `install-exec-am'.
make[6]: Nothing to be done for `install-data-am'.
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk'
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk'
Making install in AnnotaStruct
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/AnnotaStruct'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/AnnotaStruct'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/AnnotaStruct'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/AnnotaStruct'
Making install in ATGpr
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/ATGpr'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/ATGpr'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/ATGpr'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/ATGpr'
Making install in BlastX
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/BlastX'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/BlastX'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/BlastX'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/BlastX'
Making install in Est
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Est'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Est'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Est'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Est'
Making install in EuStop
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/EuStop'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/EuStop'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/EuStop'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/EuStop'
Making install in FrameShift
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/FrameShift'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/FrameShift'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/FrameShift'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/FrameShift'
Making install in GCPlot
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GCPlot'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GCPlot'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GCPlot'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GCPlot'
Making install in GFF
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GFF'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GFF'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GFF'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GFF'
Making install in GSplicer
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GSplicer'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GSplicer'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GSplicer'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GSplicer'
Making install in Homology
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Homology'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Homology'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Homology'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Homology'
Making install in IfElse
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/IfElse'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/IfElse'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/IfElse'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/IfElse'
Making install in MarkovConst
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovConst'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovConst'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovConst'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovConst'
Making install in MarkovIMM
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM'
Making install in GetData
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM/GetData'
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM/GetData'
/bin/sh ../../../../config/mkinstalldirs /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene/usr/bin
  /usr/bin/install -c  egn_TrainIMM /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene/usr/bin/egn_TrainIMM
make[6]: Nothing to be done for `install-data-am'.
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM/GetData'
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM/GetData'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM'
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM'
make[6]: Nothing to be done for `install-exec-am'.
make[6]: Nothing to be done for `install-data-am'.
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM'
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM'
Making install in MarkovProt
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt'
Making install in GetData
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt/GetData'
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt/GetData'
/bin/sh ../../../../config/mkinstalldirs /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene/usr/bin
  /usr/bin/install -c  egn_buildMarkovProt /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene/usr/bin/egn_buildMarkovProt
make[6]: Nothing to be done for `install-data-am'.
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt/GetData'
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt/GetData'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt'
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt'
make[6]: Nothing to be done for `install-exec-am'.
make[6]: Nothing to be done for `install-data-am'.
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt'
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt'
Making install in NG2
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NG2'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NG2'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NG2'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NG2'
Making install in NStart
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NStart'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NStart'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NStart'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NStart'
Making install in PatConst
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/PatConst'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/PatConst'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/PatConst'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/PatConst'
Making install in PepSignal
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/PepSignal'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/PepSignal'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/PepSignal'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/PepSignal'
Making install in Plotter
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Plotter'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Plotter'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Plotter'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Plotter'
Making install in Repeat
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Repeat'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Repeat'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Repeat'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Repeat'
Making install in Riken
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Riken'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Riken'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Riken'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Riken'
Making install in SMachine
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/SMachine'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/SMachine'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/SMachine'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/SMachine'
Making install in SPred
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/SPred'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/SPred'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/SPred'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/SPred'
Making install in SpliceWAM
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/SpliceWAM'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/SpliceWAM'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/SpliceWAM'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/SpliceWAM'
Making install in StartWAM
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/StartWAM'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/StartWAM'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/StartWAM'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/StartWAM'
Making install in Tester
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Tester'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Tester'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Tester'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Tester'
Making install in Transcript
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Transcript'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Transcript'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Transcript'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Transcript'
Making install in User
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/User'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/User'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/User'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/User'
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins'
make[3]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins'
make[2]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src'
Making install in plugins
make[2]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/plugins'
make[3]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/plugins'
make[3]: Nothing to be done for `install-exec-am'.
make[3]: Nothing to be done for `install-data-am'.
make[3]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/plugins'
make[2]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/plugins'
Making install in doc
make[2]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/doc'
make[3]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/doc'
make[3]: Nothing to be done for `install-exec-am'.
make[3]: Nothing to be done for `install-data-am'.
make[3]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/doc'
make[2]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/doc'
make[2]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
make[3]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
make[3]: Nothing to be done for `install-exec-am'.
/usr/bin/make  install-data-hook
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
install -d /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene
install -d /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/doc 
install -d /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/doc/Sequences 
install -d /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/web
install -d /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/web/Style
install -d /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/web/Javascripts
install -d /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/web/Images
install -d /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/plugins
install -d /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/cfg
install -d /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/models
install -d /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/models/WAM
install -d /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/Procedures
install -d /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/Procedures/Eval
install -d /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/Procedures/Get
install -m a-x ./doc/EuGeneDoc.pdf /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/doc
install -m a-x ./doc/Sequences/SYNO_ARATH.fasta* /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/doc/Sequences
install -m a-x ./models/*.dist /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/models
install -m a-x ./models/*.mat /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/models
install -m a-x ./models/*.bin /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/models
install -m a-x ./models/BLOSUM* /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/models
install -m a-x ./models/WAM/WAM* /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/models/WAM
install -m a-x ./web/Style/eugene.css /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/web/Style
install -m a-x ./web/Javascripts/diap.js /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/web/Javascripts
install -m a-x ./web/Images/*jpg /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/web/Images
install -m a-x ./cfg/*.par /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/cfg
install src/SensorPlugins/*/*.so  /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/plugins
install ./Procedures/Eval/egn_* /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/Procedures/Eval
install ./Procedures/Get/egn_* /home/cros/Annotation/NEW/inra-eugene-3.3/debian/inra-eugene//usr/share/eugene/Procedures/Get
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
make[3]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
make[2]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
make[1]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
dh_testdir
dh_testroot
dh_installchangelogs ChangeLog
dh_installchangelogs: Compatibility levels before 3 are deprecated.
dh_installdocs
dh_installdocs: Compatibility levels before 3 are deprecated.
dh_installexamples
dh_installexamples: Compatibility levels before 3 are deprecated.
dh_install
dh_install: Compatibility levels before 3 are deprecated.
/usr/bin/make install DESTDIR=/home/cros/Annotation/NEW/inra-eugene-3.3/debian/tmp
make[1]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3'
Making install in src
make[2]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src'
Making install in Parametrization
make[3]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/Parametrization'
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/Parametrization'
make[4]: Nothing to be done for `install-exec-am'.
make[4]: Nothing to be done for `install-data-am'.
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/Parametrization'
make[3]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/Parametrization'
Making install in GDIF
make[3]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/GDIF'
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/GDIF'
make[4]: Nothing to be done for `install-exec-am'.
make[4]: Nothing to be done for `install-data-am'.
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/GDIF'
make[3]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/GDIF'
Making install in .
make[3]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src'
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src'
/bin/sh ../config/mkinstalldirs /home/cros/Annotation/NEW/inra-eugene-3.3/debian/tmp/usr/bin
mkdir /home/cros/Annotation/NEW/inra-eugene-3.3/debian/tmp/usr/bin
  /usr/bin/install -c  eugene /home/cros/Annotation/NEW/inra-eugene-3.3/debian/tmp/usr/bin/eugene
make[4]: Nothing to be done for `install-data-am'.
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src'
make[3]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src'
Making install in SensorPlugins
make[3]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins'
Making install in 0_SensorTk
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk'
Making install in GetData
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk/GetData'
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk/GetData'
/bin/sh ../../../../config/mkinstalldirs /home/cros/Annotation/NEW/inra-eugene-3.3/debian/tmp/usr/bin
  /usr/bin/install -c  egn_WAMbuilder /home/cros/Annotation/NEW/inra-eugene-3.3/debian/tmp/usr/bin/egn_WAMbuilder
make[6]: Nothing to be done for `install-data-am'.
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk/GetData'
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk/GetData'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk'
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk'
make[6]: Nothing to be done for `install-exec-am'.
make[6]: Nothing to be done for `install-data-am'.
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk'
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/0_SensorTk'
Making install in AnnotaStruct
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/AnnotaStruct'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/AnnotaStruct'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/AnnotaStruct'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/AnnotaStruct'
Making install in ATGpr
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/ATGpr'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/ATGpr'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/ATGpr'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/ATGpr'
Making install in BlastX
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/BlastX'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/BlastX'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/BlastX'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/BlastX'
Making install in Est
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Est'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Est'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Est'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Est'
Making install in EuStop
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/EuStop'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/EuStop'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/EuStop'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/EuStop'
Making install in FrameShift
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/FrameShift'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/FrameShift'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/FrameShift'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/FrameShift'
Making install in GCPlot
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GCPlot'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GCPlot'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GCPlot'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GCPlot'
Making install in GFF
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GFF'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GFF'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GFF'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GFF'
Making install in GSplicer
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GSplicer'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GSplicer'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GSplicer'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/GSplicer'
Making install in Homology
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Homology'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Homology'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Homology'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/Homology'
Making install in IfElse
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/IfElse'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/IfElse'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/IfElse'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/IfElse'
Making install in MarkovConst
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovConst'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovConst'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovConst'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovConst'
Making install in MarkovIMM
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM'
Making install in GetData
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM/GetData'
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM/GetData'
/bin/sh ../../../../config/mkinstalldirs /home/cros/Annotation/NEW/inra-eugene-3.3/debian/tmp/usr/bin
  /usr/bin/install -c  egn_TrainIMM /home/cros/Annotation/NEW/inra-eugene-3.3/debian/tmp/usr/bin/egn_TrainIMM
make[6]: Nothing to be done for `install-data-am'.
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM/GetData'
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM/GetData'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM'
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM'
make[6]: Nothing to be done for `install-exec-am'.
make[6]: Nothing to be done for `install-data-am'.
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM'
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovIMM'
Making install in MarkovProt
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt'
Making install in GetData
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt/GetData'
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt/GetData'
/bin/sh ../../../../config/mkinstalldirs /home/cros/Annotation/NEW/inra-eugene-3.3/debian/tmp/usr/bin
  /usr/bin/install -c  egn_buildMarkovProt /home/cros/Annotation/NEW/inra-eugene-3.3/debian/tmp/usr/bin/egn_buildMarkovProt
make[6]: Nothing to be done for `install-data-am'.
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt/GetData'
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt/GetData'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt'
make[6]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt'
make[6]: Nothing to be done for `install-exec-am'.
make[6]: Nothing to be done for `install-data-am'.
make[6]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt'
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/MarkovProt'
Making install in NG2
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NG2'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NG2'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NG2'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NG2'
Making install in NStart
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NStart'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NStart'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NStart'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/NStart'
Making install in PatConst
make[4]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/PatConst'
make[5]: Entering directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/PatConst'
make[5]: Nothing to be done for `install-exec-am'.
make[5]: Nothing to be done for `install-data-am'.
make[5]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/PatConst'
make[4]: Leaving directory `/home/cros/Annotation/NEW/inra-eugene-3.3/src/SensorPlugins/PatConst'
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