diff --git a/snakecnv/tools/pindel.snk b/snakecnv/tools/pindel.snk index 74c51974d5cd63962385e145e2384d834de6b4c8..87f57fb24629fc2e50242c53bbb7ddaf1c44d968 100644 --- a/snakecnv/tools/pindel.snk +++ b/snakecnv/tools/pindel.snk @@ -62,8 +62,8 @@ rule mergepindelbatches: INV="{batch}/pindel/pindel_{chrom}_INV.gz", TD="{batch}/pindel/pindel_{chrom}_TD.gz" log: - stdout = "{batch}/logs/pindel/{chrom}_{svtype}.o", - stderr = "{batch}/logs/pindel/{chrom}_{svtype}.e", + stdout = "{batch}/logs/pindel/{chrom}.o", + stderr = "{batch}/logs/pindel/{chrom}.e", threads: 1 shell: