From 4c0abd9fa1d8e314d7baee1320411418cc10abf6 Mon Sep 17 00:00:00 2001
From: Floreal Cabanettes <floreal.cabanettes@inra.fr>
Date: Tue, 13 Mar 2018 17:38:39 +0100
Subject: [PATCH] Refactor tree
---
snakecnv/lib/svsnakemake_utils.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/snakecnv/lib/svsnakemake_utils.py b/snakecnv/lib/svsnakemake_utils.py
index 77a6921..b9bc9a8 100644
--- a/snakecnv/lib/svsnakemake_utils.py
+++ b/snakecnv/lib/svsnakemake_utils.py
@@ -61,7 +61,7 @@ class SnakemakeUtils:
inputs = []
for tool in self.tools:
if wildcards.svtype in self.tools_sv_types[tool]:
- inputs.append("{tool}/{chrom}/{svtype}/{tool}_{chrom}_{svtype}_parsed.vcf.gz".format(
+ inputs.append("{tool}/{chrom}/{tool}_{chrom}_{svtype}_parsed.vcf.gz".format(
tool=tool, chrom=wildcards.chrom, svtype=wildcards.svtype
))
return inputs
\ No newline at end of file
--
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