From 4a1cfad19ecc6e8f6539e53b9199d95484989b6a Mon Sep 17 00:00:00 2001
From: Floreal Cabanettes <floreal.cabanettes@inra.fr>
Date: Wed, 1 Aug 2018 14:27:41 +0200
Subject: [PATCH] Fix log filenames
---
snakecnv/tools/pindel.snk | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/snakecnv/tools/pindel.snk b/snakecnv/tools/pindel.snk
index e0fd635..502e609 100644
--- a/snakecnv/tools/pindel.snk
+++ b/snakecnv/tools/pindel.snk
@@ -60,8 +60,8 @@ rule mergepindelbatches:
output:
"{batch}/pindel/pindel_{chrom}_{svtype}.gz"
log:
- stdout = "{batch}/logs/pindel/{chrom}.o",
- stderr = "{batch}/logs/pindel/{chrom}.e",
+ stdout = "{batch}/logs/pindel/{chrom}_{svtype}.o",
+ stderr = "{batch}/logs/pindel/{chrom}_{svtype}.e",
threads:
1
shell:
--
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