From 24b86bc5450edbaec7b17032682c194fb8218e7c Mon Sep 17 00:00:00 2001
From: tfaraut <Thomas.Faraut@inra.fr>
Date: Tue, 23 Oct 2018 14:08:55 +0200
Subject: [PATCH] now 8 cores for delly
---
snakecnv/tools/delly.snk | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/snakecnv/tools/delly.snk b/snakecnv/tools/delly.snk
index 993ec90..8e94aae 100644
--- a/snakecnv/tools/delly.snk
+++ b/snakecnv/tools/delly.snk
@@ -12,7 +12,7 @@ rule delly:
template = EMPTY_TEMPLATE,
reference = os.path.abspath(REFERENCE)
threads:
- get_threads("delly", 4)
+ get_threads("delly", 8)
log:
stdout = "{batch}/logs/delly/{chrom}_{svtype}.o",
stderr = "{batch}/logs/delly/{chrom}_{svtype}.e"
--
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