diff --git a/tests/testthat/test-computestats.R b/tests/testthat/test-computestats.R deleted file mode 100644 index abc6b30d564d95cf3b22c11e7d519744cb22110d..0000000000000000000000000000000000000000 --- a/tests/testthat/test-computestats.R +++ /dev/null @@ -1,21 +0,0 @@ -set.seed(12081238) -base_data <- matrix(rnorm(2000), nrow = 100, ncol = 200) -group1 <- replicate(20, sample(1:100, 50, replace = FALSE)) -group2 <- replicate(20, sample(101:200, 50, replace = FALSE)) -conditions <- factor(rep(c(1, 2), each = 20)) -trees <- apply(cbind(group1, group2), 2, function(asample) { - samples <- base_data[, asample] - out <- hclust(dist(samples), method = "ward.D2") - return(out) -}) -trees1 <- trees[1:20] -trees2 <- trees[21:40] - -test_that("'compute_stats' works for simple cases", { - res <- compute_stats(trees1, trees2) - - expect_named(res, c("conditions", "cophenetics", "truncated_cophenetics", - "truncated_indices", "numerator", "variances")) - - expect_equal(length(res$numerator), length(res$truncated_indices)) -}) \ No newline at end of file