Commit 6ca53ce3 authored by Chabrier Patrick's avatar Chabrier Patrick
Browse files

config: add a job_conf.xml

enabling to use the cli runner on the muse cluster.
parent c0fb296d
......@@ -64,13 +64,13 @@ tool_sheds_conf.xml
integrated_tool_panel.xml
openid_conf.xml
shed_tool_data_table_conf.xml
job_conf.xml
#job_conf.xml
data_manager_conf.xml
shed_data_manager_conf.xml
object_store_conf.xml
job_metrics_conf.xml
workflow_schedulers_conf.xml
config/*
#config/*
config/plugins/interactive_environments/**/*.ini
!config/plugins
static/welcome.html.*
......
<?xml version="1.0"?>
<!-- A sample job config that explicitly configures job running the way it is configured by default (if there is no explicit config). -->
<job_conf>
<plugins>
<plugin id="local" type="runner" load="galaxy.jobs.runners.local:LocalJobRunner" workers="4"/>
<plugin id="cli" type="runner" load="galaxy.jobs.runners.cli:ShellJobRunner" workers="4"/>
</plugins>
<destinations default="ssh_slurm">
<destination id="local" runner="local"/>
<destination id="ssh_slurm" runner="cli">
<param id="shell_plugin">SecureShell</param>
<param id="job_plugin">Slurm</param>
<param id="shell_username">chabrierp</param>
<param id="shell_hostname">muse-login.hpc-lr.univ-montp2.fr</param>
<param id="job_time">2:00:00</param>
<param id="job_ncpus">4</param>
<param id="job_partition">defq</param>
</destination>
</destinations>
<tools>
<tool id="uname" destination="ssh_slurm" />
<tool id="unameloc" destination="local" />
<tool id="runtask" destination="ssh_slurm" />
<tool id="runtaskloc" destination="local" />
</tools>
</job_conf>
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