diff --git a/src/core/identification_sources/identificationdatasource.cpp b/src/core/identification_sources/identificationdatasource.cpp
index 0c42f3efe26b0e8a003e7c54f16fe71700296f93..a88e63e3db25684425af351431a7334d40507825 100644
--- a/src/core/identification_sources/identificationdatasource.cpp
+++ b/src/core/identification_sources/identificationdatasource.cpp
@@ -254,7 +254,9 @@ IdentificationDataSource::getMassSpectrumCstSPtr(unsigned int scan_number) const
       spectrum_index =
         msrun_reader_sp.get()->scanNumber2SpectrumIndex(scan_number);
     }
-  qDebug() << " spectrum file=" <<  msrun_reader_sp.get()->getMsRunId().get()->getFileName() << " index=" << spectrum_index;
+  qDebug() << " spectrum file="
+           << msrun_reader_sp.get()->getMsRunId().get()->getFileName()
+           << " index=" << spectrum_index;
   pappso::MassSpectrumCstSPtr spectrum_sp =
     msrun_reader_sp.get()->massSpectrumCstSPtr(spectrum_index);
   qDebug();
@@ -269,8 +271,6 @@ IdentificationDataSource::addFastaFile(FastaFileSp file)
 const std::vector<FastaFileSp> &
 IdentificationDataSource::getFastaFileList() const
 {
-  qDebug() << "IdentificationDataSource::getFastaFileList begin"
-           << _fastafile_list.size();
   return _fastafile_list;
 }
 
diff --git a/src/core/tandem_run/tandembatchprocess.cpp b/src/core/tandem_run/tandembatchprocess.cpp
index b771faa76e53786655237afd2f3e53cc938767bb..3a96e92bfce3fb707f4ca83aecfce0080b92bc1c 100644
--- a/src/core/tandem_run/tandembatchprocess.cpp
+++ b/src/core/tandem_run/tandembatchprocess.cpp
@@ -427,15 +427,6 @@ TandemBatchProcess::runOne(const QString &mz_file)
           pappso::TandemWrapperRun tandem_run(
             _tandem_run_batch._tandem_bin_path, tmpDirOption);
 
-          std::shared_ptr<pappso::FilterSuite> ms2_filter_suite =
-            std::make_shared<pappso::FilterSuite>();
-
-          ms2_filter_suite.get()->push_back(
-            std::make_shared<pappso::FilterChargeDeconvolution>(
-              pappso::PrecisionFactory::getDaltonInstance(0.01)));
-
-          tandem_run.setMs2FilterSuite(ms2_filter_suite);
-
           tandem_run.run(xml_input_file.fileName(), outputStream, errorStream);
 
 
diff --git a/src/core/tandem_run/tandemparameters.cpp b/src/core/tandem_run/tandemparameters.cpp
index 1fc0c35cb316b96f2269399f8d42d567cd5552c9..89e99f9d53f5637ba0f54b7ef1c023aea492282e 100644
--- a/src/core/tandem_run/tandemparameters.cpp
+++ b/src/core/tandem_run/tandemparameters.cpp
@@ -273,7 +273,7 @@ TandemParameters::setParamLabelValue(const QString &label, const QString &value)
           (label == "residue, potential modification motif 1") ||
           (label == "residue, potential modification motif 2") ||
           (label == "residue, potential modification motif 3") ||
-          (label == "spectrum, timstof MS2 centroid parameters"))
+          (label == "spectrum, timstof MS2 filters"))
     {
       // string
     }
diff --git a/src/gui/edit/edit_tandem_preset_dialog/edit_tandem_preset_dialog.ui b/src/gui/edit/edit_tandem_preset_dialog/edit_tandem_preset_dialog.ui
index fce14fe410a06bdc36f5e62dcf9162ea8f95e5c3..73b2f9cf5399f4aded12bc0008317d0d1086e460 100644
--- a/src/gui/edit/edit_tandem_preset_dialog/edit_tandem_preset_dialog.ui
+++ b/src/gui/edit/edit_tandem_preset_dialog/edit_tandem_preset_dialog.ui
@@ -25,45 +25,112 @@
   <property name="windowTitle">
    <string>X!Tandem preset editor</string>
   </property>
+  <property name="toolTip">
+   <string/>
+  </property>
   <layout class="QVBoxLayout" name="verticalLayout_2">
    <item>
-    <widget class="QMenuBar" name="menubar">
-     <property name="sizePolicy">
-      <sizepolicy hsizetype="Minimum" vsizetype="Fixed">
-       <horstretch>0</horstretch>
-       <verstretch>0</verstretch>
-      </sizepolicy>
-     </property>
-    </widget>
-   </item>
-   <item>
-    <layout class="QHBoxLayout" name="horizontalLayout_2">
-     <item>
-      <widget class="QComboBox" name="preset_combo_box"/>
+    <layout class="QGridLayout" name="gridLayout_7">
+     <item row="1" column="0">
+      <widget class="QComboBox" name="preset_combo_box">
+       <property name="enabled">
+        <bool>true</bool>
+       </property>
+       <property name="sizePolicy">
+        <sizepolicy hsizetype="MinimumExpanding" vsizetype="Fixed">
+         <horstretch>0</horstretch>
+         <verstretch>0</verstretch>
+        </sizepolicy>
+       </property>
+       <property name="editable">
+        <bool>false</bool>
+       </property>
+      </widget>
      </item>
-     <item>
+     <item row="1" column="2">
       <widget class="QPushButton" name="pushButton_5">
+       <property name="enabled">
+        <bool>false</bool>
+       </property>
        <property name="sizePolicy">
-        <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
+        <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
          <horstretch>0</horstretch>
          <verstretch>0</verstretch>
         </sizepolicy>
        </property>
        <property name="text">
-        <string>Load</string>
+        <string> Load</string>
+       </property>
+       <property name="icon">
+        <iconset theme="document-open">
+         <normaloff>.</normaloff>.</iconset>
        </property>
       </widget>
      </item>
-     <item>
+     <item row="0" column="0">
+      <widget class="QLabel" name="label_loaded_directory">
+       <property name="font">
+        <font>
+         <weight>75</weight>
+         <bold>true</bold>
+         <underline>false</underline>
+         <kerning>true</kerning>
+        </font>
+       </property>
+       <property name="text">
+        <string>Select a preset directory</string>
+       </property>
+      </widget>
+     </item>
+     <item row="0" column="2">
       <widget class="QPushButton" name="pushButton_6">
        <property name="sizePolicy">
-        <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
+        <sizepolicy hsizetype="Minimum" vsizetype="Fixed">
          <horstretch>0</horstretch>
          <verstretch>0</verstretch>
         </sizepolicy>
        </property>
+       <property name="toolTip">
+        <string>Select the preset directory</string>
+       </property>
+       <property name="layoutDirection">
+        <enum>Qt::LeftToRight</enum>
+       </property>
        <property name="text">
-        <string>Preset directory</string>
+        <string/>
+       </property>
+       <property name="icon">
+        <iconset resource="../../../xtpcpp.qrc">
+         <normaloff>:/icons/resources/icons/apache/firefox/folder_icon.svg</normaloff>:/icons/resources/icons/apache/firefox/folder_icon.svg</iconset>
+       </property>
+       <property name="iconSize">
+        <size>
+         <width>20</width>
+         <height>20</height>
+        </size>
+       </property>
+       <property name="default">
+        <bool>false</bool>
+       </property>
+       <property name="flat">
+        <bool>false</bool>
+       </property>
+      </widget>
+     </item>
+     <item row="1" column="1">
+      <widget class="QPushButton" name="pushButton">
+       <property name="enabled">
+        <bool>false</bool>
+       </property>
+       <property name="toolTip">
+        <string extracomment="Create a new preset for X!Tandem"/>
+       </property>
+       <property name="text">
+        <string extracomment="Create a new preset for X!Tandem">New</string>
+       </property>
+       <property name="icon">
+        <iconset theme="list-add">
+         <normaloff>.</normaloff>.</iconset>
        </property>
       </widget>
      </item>
@@ -71,43 +138,52 @@
    </item>
    <item>
     <widget class="QSplitter" name="splitter">
+     <property name="sizePolicy">
+      <sizepolicy hsizetype="Expanding" vsizetype="Expanding">
+       <horstretch>0</horstretch>
+       <verstretch>0</verstretch>
+      </sizepolicy>
+     </property>
      <property name="orientation">
       <enum>Qt::Horizontal</enum>
      </property>
+     <property name="opaqueResize">
+      <bool>true</bool>
+     </property>
+     <property name="childrenCollapsible">
+      <bool>true</bool>
+     </property>
      <widget class="QWidget" name="widget_2" native="true">
       <layout class="QVBoxLayout" name="verticalLayout_7">
-       <item>
-        <layout class="QHBoxLayout" name="horizontalLayout_3">
-         <item>
-          <widget class="QLineEdit" name="method_name_line_edit"/>
-         </item>
-         <item>
-          <widget class="QPushButton" name="pushButton">
-           <property name="toolTip">
-            <string extracomment="Create a new preset for X!Tandem"/>
-           </property>
-           <property name="text">
-            <string extracomment="Create a new preset for X!Tandem">New</string>
-           </property>
-          </widget>
-         </item>
-         <item>
-          <widget class="QPushButton" name="save">
-           <property name="toolTip">
-            <string extracomment="Save these parameters in the current preset"/>
-           </property>
-           <property name="text">
-            <string>Save</string>
-           </property>
-          </widget>
-         </item>
-        </layout>
-       </item>
        <item>
         <widget class="QTabWidget" name="tabWidget">
+         <property name="tabPosition">
+          <enum>QTabWidget::North</enum>
+         </property>
+         <property name="tabShape">
+          <enum>QTabWidget::Rounded</enum>
+         </property>
          <property name="currentIndex">
           <number>0</number>
          </property>
+         <property name="elideMode">
+          <enum>Qt::ElideNone</enum>
+         </property>
+         <property name="usesScrollButtons">
+          <bool>true</bool>
+         </property>
+         <property name="documentMode">
+          <bool>false</bool>
+         </property>
+         <property name="tabsClosable">
+          <bool>false</bool>
+         </property>
+         <property name="movable">
+          <bool>false</bool>
+         </property>
+         <property name="tabBarAutoHide">
+          <bool>false</bool>
+         </property>
          <widget class="QWidget" name="spectrum_tab">
           <property name="sizePolicy">
            <sizepolicy hsizetype="Preferred" vsizetype="Preferred">
@@ -137,14 +213,64 @@
               <property name="geometry">
                <rect>
                 <x>0</x>
-                <y>-379</y>
-                <width>984</width>
-                <height>835</height>
+                <y>-154</y>
+                <width>875</width>
+                <height>691</height>
                </rect>
               </property>
               <layout class="QVBoxLayout" name="verticalLayout_3">
                <item>
                 <layout class="QGridLayout" name="gridLayout_2">
+                 <item row="21" column="2">
+                  <widget class="QToolButton" name="ttfparam_button">
+                   <property name="text">
+                    <string>...</string>
+                   </property>
+                   <property name="icon">
+                    <iconset resource="../../../xtpcpp.qrc">
+                     <normaloff>:/icons/resources/icons/icon_info.svg</normaloff>:/icons/resources/icons/icon_info.svg</iconset>
+                   </property>
+                   <property name="iconSize">
+                    <size>
+                     <width>20</width>
+                     <height>20</height>
+                    </size>
+                   </property>
+                   <property name="autoRaise">
+                    <bool>true</bool>
+                   </property>
+                  </widget>
+                 </item>
+                 <item row="19" column="2">
+                  <widget class="QToolButton" name="st_push_button">
+                   <property name="text">
+                    <string/>
+                   </property>
+                   <property name="icon">
+                    <iconset resource="../../../xtpcpp.qrc">
+                     <normaloff>:/icons/resources/icons/icon_info.svg</normaloff>:/icons/resources/icons/icon_info.svg</iconset>
+                   </property>
+                   <property name="iconSize">
+                    <size>
+                     <width>20</width>
+                     <height>20</height>
+                    </size>
+                   </property>
+                   <property name="autoRaise">
+                    <bool>true</bool>
+                   </property>
+                  </widget>
+                 </item>
+                 <item row="21" column="0">
+                  <widget class="QLabel" name="label_77">
+                   <property name="text">
+                    <string>TimsTOF filters + parameters</string>
+                   </property>
+                  </widget>
+                 </item>
+                 <item row="21" column="1">
+                  <widget class="QLineEdit" name="ttfparam_edit"/>
+                 </item>
                  <item row="9" column="0">
                   <widget class="QLabel" name="label_78">
                    <property name="text">
@@ -526,17 +652,14 @@
                  <item row="11" column="1">
                   <layout class="QHBoxLayout" name="horizontalLayout_37"/>
                  </item>
-                 <item row="0" column="2">
-                  <widget class="QToolButton" name="spmmeu_push_button">
+                 <item row="1" column="2">
+                  <widget class="QToolButton" name="spmmem_push_button">
                    <property name="sizePolicy">
                     <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
                      <horstretch>0</horstretch>
                      <verstretch>0</verstretch>
                     </sizepolicy>
                    </property>
-                   <property name="accessibleName">
-                    <string notr="true">parent_ion_window_unit</string>
-                   </property>
                    <property name="text">
                     <string/>
                    </property>
@@ -555,14 +678,17 @@
                    </property>
                   </widget>
                  </item>
-                 <item row="1" column="2">
-                  <widget class="QToolButton" name="spmmem_push_button">
+                 <item row="0" column="2">
+                  <widget class="QToolButton" name="spmmeu_push_button">
                    <property name="sizePolicy">
                     <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
                      <horstretch>0</horstretch>
                      <verstretch>0</verstretch>
                     </sizepolicy>
                    </property>
+                   <property name="accessibleName">
+                    <string notr="true">parent_ion_window_unit</string>
+                   </property>
                    <property name="text">
                     <string/>
                    </property>
@@ -913,183 +1039,41 @@
                    </property>
                   </widget>
                  </item>
-                 <item row="19" column="2">
-                  <widget class="QToolButton" name="st_push_button">
-                   <property name="text">
-                    <string/>
+                 <item row="20" column="0">
+                  <widget class="Line" name="line">
+                   <property name="sizePolicy">
+                    <sizepolicy hsizetype="Minimum" vsizetype="Fixed">
+                     <horstretch>0</horstretch>
+                     <verstretch>0</verstretch>
+                    </sizepolicy>
                    </property>
-                   <property name="icon">
-                    <iconset resource="../../../xtpcpp.qrc">
-                     <normaloff>:/icons/resources/icons/icon_info.svg</normaloff>:/icons/resources/icons/icon_info.svg</iconset>
+                   <property name="orientation">
+                    <enum>Qt::Horizontal</enum>
                    </property>
-                   <property name="iconSize">
-                    <size>
-                     <width>20</width>
-                     <height>20</height>
-                    </size>
+                  </widget>
+                 </item>
+                 <item row="20" column="1">
+                  <widget class="Line" name="line_2">
+                   <property name="sizePolicy">
+                    <sizepolicy hsizetype="Minimum" vsizetype="Fixed">
+                     <horstretch>0</horstretch>
+                     <verstretch>0</verstretch>
+                    </sizepolicy>
                    </property>
-                   <property name="autoRaise">
-                    <bool>true</bool>
+                   <property name="orientation">
+                    <enum>Qt::Horizontal</enum>
+                   </property>
+                  </widget>
+                 </item>
+                 <item row="20" column="2">
+                  <widget class="Line" name="line_3">
+                   <property name="orientation">
+                    <enum>Qt::Horizontal</enum>
                    </property>
                   </widget>
                  </item>
                 </layout>
                </item>
-               <item>
-                <widget class="QGroupBox" name="centroid_group_box">
-                 <property name="title">
-                  <string>TIMS TOF MS&amp;2 centroid parameters</string>
-                 </property>
-                 <property name="flat">
-                  <bool>false</bool>
-                 </property>
-                 <property name="checkable">
-                  <bool>true</bool>
-                 </property>
-                 <property name="checked">
-                  <bool>false</bool>
-                 </property>
-                 <layout class="QVBoxLayout" name="verticalLayout_16">
-                  <item>
-                   <layout class="QGridLayout" name="gridLayout_7">
-                    <item row="0" column="2">
-                     <widget class="QLineEdit" name="instru_res_line"/>
-                    </item>
-                    <item row="3" column="0">
-                     <widget class="QLabel" name="label_38">
-                      <property name="text">
-                       <string>Intensity threshold</string>
-                      </property>
-                     </widget>
-                    </item>
-                    <item row="1" column="2">
-                     <widget class="QLineEdit" name="smwi_line"/>
-                    </item>
-                    <item row="3" column="2">
-                     <widget class="QLineEdit" name="intthre_line"/>
-                    </item>
-                    <item row="2" column="2">
-                     <widget class="QLineEdit" name="intwi_line"/>
-                    </item>
-                    <item row="0" column="0">
-                     <widget class="QLabel" name="label_34">
-                      <property name="text">
-                       <string>Instrument resolution</string>
-                      </property>
-                     </widget>
-                    </item>
-                    <item row="2" column="0">
-                     <widget class="QLabel" name="label_37">
-                      <property name="text">
-                       <string>Integration width</string>
-                      </property>
-                     </widget>
-                    </item>
-                    <item row="1" column="0">
-                     <widget class="QLabel" name="label_35">
-                      <property name="text">
-                       <string>Smooth width</string>
-                      </property>
-                     </widget>
-                    </item>
-                    <item row="0" column="3">
-                     <widget class="QToolButton" name="ttcp1_button">
-                      <property name="text">
-                       <string/>
-                      </property>
-                      <property name="icon">
-                       <iconset resource="../../../xtpcpp.qrc">
-                        <normaloff>:/icons/resources/icons/icon_info.svg</normaloff>:/icons/resources/icons/icon_info.svg</iconset>
-                      </property>
-                      <property name="iconSize">
-                       <size>
-                        <width>20</width>
-                        <height>20</height>
-                       </size>
-                      </property>
-                      <property name="autoRaise">
-                       <bool>true</bool>
-                      </property>
-                     </widget>
-                    </item>
-                    <item row="1" column="3">
-                     <widget class="QToolButton" name="ttcp2_button">
-                      <property name="text">
-                       <string>...</string>
-                      </property>
-                      <property name="icon">
-                       <iconset resource="../../../xtpcpp.qrc">
-                        <normaloff>:/icons/resources/icons/icon_info.svg</normaloff>:/icons/resources/icons/icon_info.svg</iconset>
-                      </property>
-                      <property name="iconSize">
-                       <size>
-                        <width>20</width>
-                        <height>20</height>
-                       </size>
-                      </property>
-                      <property name="autoRaise">
-                       <bool>true</bool>
-                      </property>
-                     </widget>
-                    </item>
-                    <item row="2" column="3">
-                     <widget class="QToolButton" name="ttcp3_button">
-                      <property name="text">
-                       <string>...</string>
-                      </property>
-                      <property name="icon">
-                       <iconset resource="../../../xtpcpp.qrc">
-                        <normaloff>:/icons/resources/icons/icon_info.svg</normaloff>:/icons/resources/icons/icon_info.svg</iconset>
-                      </property>
-                      <property name="iconSize">
-                       <size>
-                        <width>20</width>
-                        <height>20</height>
-                       </size>
-                      </property>
-                      <property name="autoRaise">
-                       <bool>true</bool>
-                      </property>
-                     </widget>
-                    </item>
-                    <item row="3" column="3">
-                     <widget class="QToolButton" name="ttcp4_button">
-                      <property name="text">
-                       <string>...</string>
-                      </property>
-                      <property name="icon">
-                       <iconset resource="../../../xtpcpp.qrc">
-                        <normaloff>:/icons/resources/icons/icon_info.svg</normaloff>:/icons/resources/icons/icon_info.svg</iconset>
-                      </property>
-                      <property name="iconSize">
-                       <size>
-                        <width>20</width>
-                        <height>20</height>
-                       </size>
-                      </property>
-                      <property name="autoRaise">
-                       <bool>true</bool>
-                      </property>
-                     </widget>
-                    </item>
-                   </layout>
-                  </item>
-                 </layout>
-                </widget>
-               </item>
-               <item>
-                <spacer name="verticalSpacer">
-                 <property name="orientation">
-                  <enum>Qt::Vertical</enum>
-                 </property>
-                 <property name="sizeHint" stdset="0">
-                  <size>
-                   <width>20</width>
-                   <height>40</height>
-                  </size>
-                 </property>
-                </spacer>
-               </item>
               </layout>
              </widget>
             </widget>
@@ -1111,8 +1095,8 @@
                <rect>
                 <x>0</x>
                 <y>0</y>
-                <width>998</width>
-                <height>456</height>
+                <width>505</width>
+                <height>350</height>
                </rect>
               </property>
               <layout class="QVBoxLayout" name="verticalLayout_6">
@@ -1590,8 +1574,8 @@
                <rect>
                 <x>0</x>
                 <y>0</y>
-                <width>998</width>
-                <height>456</height>
+                <width>279</width>
+                <height>185</height>
                </rect>
               </property>
               <layout class="QVBoxLayout" name="verticalLayout_9">
@@ -1783,8 +1767,8 @@
                <rect>
                 <x>0</x>
                 <y>0</y>
-                <width>998</width>
-                <height>456</height>
+                <width>478</width>
+                <height>350</height>
                </rect>
               </property>
               <layout class="QVBoxLayout" name="verticalLayout_11">
@@ -2398,7 +2382,7 @@
                <rect>
                 <x>0</x>
                 <y>0</y>
-                <width>984</width>
+                <width>494</width>
                 <height>614</height>
                </rect>
               </property>
@@ -3185,7 +3169,7 @@
                <rect>
                 <x>0</x>
                 <y>0</y>
-                <width>984</width>
+                <width>550</width>
                 <height>457</height>
                </rect>
               </property>
@@ -3348,7 +3332,7 @@
                    <item>
                     <widget class="QRadioButton" name="oresu_stochastic_radio_button">
                      <property name="text">
-                      <string>stochastic</string>
+                      <string>stoc&amp;hastic</string>
                      </property>
                      <attribute name="buttonGroup">
                       <string notr="true">oresu_button_group</string>
@@ -3394,7 +3378,7 @@
                       <bool>false</bool>
                      </property>
                      <property name="text">
-                      <string>protein</string>
+                      <string>p&amp;rotein</string>
                      </property>
                      <attribute name="buttonGroup">
                       <string notr="true">buttonGroup</string>
@@ -3996,7 +3980,39 @@
        </item>
       </layout>
      </widget>
-     <widget class="QTextEdit" name="doc_plain_text_edit"/>
+     <widget class="QWidget" name="verticalLayoutWidget">
+      <layout class="QVBoxLayout" name="verticalLayout_17">
+       <item>
+        <widget class="QLabel" name="method_name_label">
+         <property name="font">
+          <font>
+           <weight>75</weight>
+           <bold>true</bold>
+          </font>
+         </property>
+         <property name="text">
+          <string>No preset file loaded (default parameters represented)</string>
+         </property>
+        </widget>
+       </item>
+       <item>
+        <widget class="QTextEdit" name="doc_plain_text_edit">
+         <property name="sizePolicy">
+          <sizepolicy hsizetype="Expanding" vsizetype="Expanding">
+           <horstretch>0</horstretch>
+           <verstretch>0</verstretch>
+          </sizepolicy>
+         </property>
+         <property name="sizeAdjustPolicy">
+          <enum>QAbstractScrollArea::AdjustIgnored</enum>
+         </property>
+         <property name="lineWrapMode">
+          <enum>QTextEdit::WidgetWidth</enum>
+         </property>
+        </widget>
+       </item>
+      </layout>
+     </widget>
     </widget>
    </item>
    <item>
@@ -4024,6 +4040,10 @@
          <property name="text">
           <string>Cancel</string>
          </property>
+         <property name="icon">
+          <iconset theme="window-close">
+           <normaloff>.</normaloff>.</iconset>
+         </property>
         </widget>
        </item>
        <item>
@@ -4031,22 +4051,16 @@
          <property name="text">
           <string>OK</string>
          </property>
+         <property name="icon">
+          <iconset theme="system-run">
+           <normaloff>.</normaloff>.</iconset>
+         </property>
         </widget>
        </item>
       </layout>
      </item>
     </layout>
    </item>
-   <item>
-    <widget class="QStatusBar" name="statusbar">
-     <property name="sizePolicy">
-      <sizepolicy hsizetype="Preferred" vsizetype="Fixed">
-       <horstretch>0</horstretch>
-       <verstretch>0</verstretch>
-      </sizepolicy>
-     </property>
-    </widget>
-   </item>
   </layout>
  </widget>
  <resources>
@@ -4061,7 +4075,7 @@
    <hints>
     <hint type="sourcelabel">
      <x>1343</x>
-     <y>684</y>
+     <y>718</y>
     </hint>
     <hint type="destinationlabel">
      <x>881</x>
@@ -4077,7 +4091,7 @@
    <hints>
     <hint type="sourcelabel">
      <x>1429</x>
-     <y>684</y>
+     <y>718</y>
     </hint>
     <hint type="destinationlabel">
      <x>879</x>
@@ -4086,98 +4100,98 @@
    </hints>
   </connection>
   <connection>
-   <sender>save</sender>
+   <sender>pushButton</sender>
    <signal>clicked()</signal>
    <receiver>EditTandemPresetView</receiver>
-   <slot>doSave()</slot>
+   <slot>doCopy()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1030</x>
-     <y>113</y>
+     <x>1344</x>
+     <y>68</y>
     </hint>
     <hint type="destinationlabel">
-     <x>1542</x>
-     <y>134</y>
+     <x>707</x>
+     <y>1103</y>
     </hint>
    </hints>
   </connection>
   <connection>
-   <sender>pushButton</sender>
+   <sender>pushButton_5</sender>
    <signal>clicked()</signal>
    <receiver>EditTandemPresetView</receiver>
-   <slot>doCopy()</slot>
+   <slot>doLoad()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>944</x>
-     <y>113</y>
+     <x>1430</x>
+     <y>68</y>
     </hint>
     <hint type="destinationlabel">
-     <x>707</x>
-     <y>1103</y>
+     <x>1737</x>
+     <y>106</y>
     </hint>
    </hints>
   </connection>
   <connection>
-   <sender>parent_ion_lower_window_edit</sender>
-   <signal>textChanged(QString)</signal>
+   <sender>pushButton_6</sender>
+   <signal>clicked()</signal>
    <receiver>EditTandemPresetView</receiver>
-   <slot>doEdit(QString)</slot>
+   <slot>doSelectDir()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>969</x>
-     <y>-141</y>
+     <x>1430</x>
+     <y>35</y>
     </hint>
     <hint type="destinationlabel">
-     <x>464</x>
-     <y>1032</y>
+     <x>1796</x>
+     <y>138</y>
     </hint>
    </hints>
   </connection>
   <connection>
-   <sender>parent_ion_upper_window_edit</sender>
-   <signal>textChanged(QString)</signal>
+   <sender>ttfparam_button</sender>
+   <signal>clicked()</signal>
    <receiver>EditTandemPresetView</receiver>
-   <slot>doEdit(QString)</slot>
+   <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>969</x>
-     <y>-108</y>
+     <x>1105</x>
+     <y>793</y>
     </hint>
     <hint type="destinationlabel">
-     <x>798</x>
-     <y>842</y>
+     <x>720</x>
+     <y>364</y>
     </hint>
    </hints>
   </connection>
   <connection>
-   <sender>pushButton_5</sender>
-   <signal>clicked()</signal>
+   <sender>parent_ion_upper_window_edit</sender>
+   <signal>textChanged(QString)</signal>
    <receiver>EditTandemPresetView</receiver>
-   <slot>doLoad()</slot>
+   <slot>doEdit(QString)</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1309</x>
-     <y>71</y>
+     <x>969</x>
+     <y>202</y>
     </hint>
     <hint type="destinationlabel">
-     <x>1737</x>
-     <y>106</y>
+     <x>798</x>
+     <y>842</y>
     </hint>
    </hints>
   </connection>
   <connection>
-   <sender>pushButton_6</sender>
-   <signal>clicked()</signal>
+   <sender>parent_ion_lower_window_edit</sender>
+   <signal>textChanged(QString)</signal>
    <receiver>EditTandemPresetView</receiver>
-   <slot>doSelectDir()</slot>
+   <slot>doEdit(QString)</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1430</x>
-     <y>68</y>
+     <x>969</x>
+     <y>169</y>
     </hint>
     <hint type="destinationlabel">
-     <x>1796</x>
-     <y>138</y>
+     <x>464</x>
+     <y>1032</y>
     </hint>
    </hints>
   </connection>
@@ -4188,8 +4202,8 @@
    <slot>doResultType()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>344</x>
-     <y>262</y>
+     <x>366</x>
+     <y>227</y>
     </hint>
     <hint type="destinationlabel">
      <x>941</x>
@@ -4204,8 +4218,8 @@
    <slot>doResultType()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>397</x>
-     <y>256</y>
+     <x>429</x>
+     <y>227</y>
     </hint>
     <hint type="destinationlabel">
      <x>1055</x>
@@ -4214,34 +4228,34 @@
    </hints>
   </connection>
   <connection>
-   <sender>oresu_stochastic_radio_button</sender>
+   <sender>spmmeu_push_button</sender>
    <signal>clicked()</signal>
    <receiver>EditTandemPresetView</receiver>
-   <slot>doResultType()</slot>
+   <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>442</x>
-     <y>257</y>
+     <x>1119</x>
+     <y>136</y>
     </hint>
     <hint type="destinationlabel">
-     <x>-126</x>
-     <y>108</y>
+     <x>1460</x>
+     <y>186</y>
     </hint>
    </hints>
   </connection>
   <connection>
-   <sender>spmmeu_push_button</sender>
+   <sender>oresu_stochastic_radio_button</sender>
    <signal>clicked()</signal>
    <receiver>EditTandemPresetView</receiver>
-   <slot>doHelp()</slot>
+   <slot>doResultType()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>-174</y>
+     <x>528</x>
+     <y>227</y>
     </hint>
     <hint type="destinationlabel">
-     <x>1460</x>
-     <y>186</y>
+     <x>-126</x>
+     <y>108</y>
     </hint>
    </hints>
   </connection>
@@ -4252,8 +4266,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>-141</y>
+     <x>1119</x>
+     <y>169</y>
     </hint>
     <hint type="destinationlabel">
      <x>1460</x>
@@ -4268,8 +4282,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>-108</y>
+     <x>1119</x>
+     <y>202</y>
     </hint>
     <hint type="destinationlabel">
      <x>1476</x>
@@ -4284,8 +4298,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>-75</y>
+     <x>1119</x>
+     <y>235</y>
     </hint>
     <hint type="destinationlabel">
      <x>1454</x>
@@ -4300,8 +4314,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>-42</y>
+     <x>1119</x>
+     <y>268</y>
     </hint>
     <hint type="destinationlabel">
      <x>1478</x>
@@ -4316,8 +4330,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>-9</y>
+     <x>1119</x>
+     <y>301</y>
     </hint>
     <hint type="destinationlabel">
      <x>1464</x>
@@ -4332,8 +4346,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>24</y>
+     <x>1119</x>
+     <y>339</y>
     </hint>
     <hint type="destinationlabel">
      <x>1467</x>
@@ -4348,8 +4362,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>57</y>
+     <x>1119</x>
+     <y>393</y>
     </hint>
     <hint type="destinationlabel">
      <x>1464</x>
@@ -4364,8 +4378,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>90</y>
+     <x>1119</x>
+     <y>426</y>
     </hint>
     <hint type="destinationlabel">
      <x>1460</x>
@@ -4380,8 +4394,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>123</y>
+     <x>1119</x>
+     <y>459</y>
     </hint>
     <hint type="destinationlabel">
      <x>1463</x>
@@ -4396,8 +4410,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>156</y>
+     <x>1119</x>
+     <y>492</y>
     </hint>
     <hint type="destinationlabel">
      <x>1461</x>
@@ -4412,8 +4426,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>197</y>
+     <x>1119</x>
+     <y>533</y>
     </hint>
     <hint type="destinationlabel">
      <x>1458</x>
@@ -4428,8 +4442,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>230</y>
+     <x>1119</x>
+     <y>566</y>
     </hint>
     <hint type="destinationlabel">
      <x>1473</x>
@@ -4444,8 +4458,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>263</y>
+     <x>1119</x>
+     <y>599</y>
     </hint>
     <hint type="destinationlabel">
      <x>1494</x>
@@ -4460,8 +4474,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>428</y>
+     <x>1119</x>
+     <y>764</y>
     </hint>
     <hint type="destinationlabel">
      <x>1437</x>
@@ -4476,8 +4490,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>395</y>
+     <x>1119</x>
+     <y>731</y>
     </hint>
     <hint type="destinationlabel">
      <x>1439</x>
@@ -4492,8 +4506,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>362</y>
+     <x>1119</x>
+     <y>698</y>
     </hint>
     <hint type="destinationlabel">
      <x>1439</x>
@@ -4508,8 +4522,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>329</y>
+     <x>1119</x>
+     <y>665</y>
     </hint>
     <hint type="destinationlabel">
      <x>1440</x>
@@ -4524,8 +4538,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>296</y>
+     <x>1119</x>
+     <y>632</y>
     </hint>
     <hint type="destinationlabel">
      <x>1438</x>
@@ -4540,8 +4554,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1007</x>
-     <y>192</y>
+     <x>1133</x>
+     <y>162</y>
     </hint>
     <hint type="destinationlabel">
      <x>1468</x>
@@ -4556,8 +4570,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1005</x>
-     <y>495</y>
+     <x>1133</x>
+     <y>459</y>
     </hint>
     <hint type="destinationlabel">
      <x>1451</x>
@@ -4572,8 +4586,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1014</x>
-     <y>455</y>
+     <x>1133</x>
+     <y>426</y>
     </hint>
     <hint type="destinationlabel">
      <x>1452</x>
@@ -4588,8 +4602,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>997</x>
-     <y>423</y>
+     <x>1133</x>
+     <y>393</y>
     </hint>
     <hint type="destinationlabel">
      <x>1474</x>
@@ -4604,8 +4618,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1005</x>
-     <y>390</y>
+     <x>1133</x>
+     <y>360</y>
     </hint>
     <hint type="destinationlabel">
      <x>1448</x>
@@ -4620,8 +4634,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>356</y>
+     <x>1133</x>
+     <y>327</y>
     </hint>
     <hint type="destinationlabel">
      <x>1451</x>
@@ -4636,8 +4650,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1015</x>
-     <y>317</y>
+     <x>1133</x>
+     <y>294</y>
     </hint>
     <hint type="destinationlabel">
      <x>1438</x>
@@ -4652,8 +4666,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1017</x>
-     <y>293</y>
+     <x>1133</x>
+     <y>261</y>
     </hint>
     <hint type="destinationlabel">
      <x>1437</x>
@@ -4668,8 +4682,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>256</y>
+     <x>1133</x>
+     <y>228</y>
     </hint>
     <hint type="destinationlabel">
      <x>1438</x>
@@ -4684,8 +4698,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1008</x>
-     <y>230</y>
+     <x>1133</x>
+     <y>195</y>
     </hint>
     <hint type="destinationlabel">
      <x>1437</x>
@@ -4700,8 +4714,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1011</x>
-     <y>193</y>
+     <x>1133</x>
+     <y>162</y>
     </hint>
     <hint type="destinationlabel">
      <x>1439</x>
@@ -4716,8 +4730,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1013</x>
-     <y>222</y>
+     <x>1133</x>
+     <y>195</y>
     </hint>
     <hint type="destinationlabel">
      <x>1440</x>
@@ -4732,8 +4746,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1005</x>
-     <y>320</y>
+     <x>1133</x>
+     <y>294</y>
     </hint>
     <hint type="destinationlabel">
      <x>1438</x>
@@ -4748,8 +4762,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1010</x>
-     <y>290</y>
+     <x>1133</x>
+     <y>261</y>
     </hint>
     <hint type="destinationlabel">
      <x>1043</x>
@@ -4764,8 +4778,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>999</x>
-     <y>257</y>
+     <x>1133</x>
+     <y>228</y>
     </hint>
     <hint type="destinationlabel">
      <x>1023</x>
@@ -4774,34 +4788,34 @@
    </hints>
   </connection>
   <connection>
-   <sender>smic_push_button</sender>
+   <sender>smmcs_push_button</sender>
    <signal>clicked()</signal>
    <receiver>EditTandemPresetView</receiver>
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1011</x>
-     <y>189</y>
+     <x>1133</x>
+     <y>195</y>
     </hint>
     <hint type="destinationlabel">
-     <x>-28</x>
-     <y>193</y>
+     <x>-12</x>
+     <y>219</y>
     </hint>
    </hints>
   </connection>
   <connection>
-   <sender>smmcs_push_button</sender>
+   <sender>smic_push_button</sender>
    <signal>clicked()</signal>
    <receiver>EditTandemPresetView</receiver>
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1000</x>
-     <y>217</y>
+     <x>1133</x>
+     <y>162</y>
     </hint>
     <hint type="destinationlabel">
-     <x>-12</x>
-     <y>219</y>
+     <x>-28</x>
+     <y>193</y>
     </hint>
    </hints>
   </connection>
@@ -4812,8 +4826,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1004</x>
-     <y>256</y>
+     <x>1133</x>
+     <y>228</y>
     </hint>
     <hint type="destinationlabel">
      <x>-101</x>
@@ -4828,8 +4842,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1009</x>
-     <y>295</y>
+     <x>1133</x>
+     <y>261</y>
     </hint>
     <hint type="destinationlabel">
      <x>-47</x>
@@ -4844,8 +4858,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>995</x>
-     <y>328</y>
+     <x>1133</x>
+     <y>294</y>
     </hint>
     <hint type="destinationlabel">
      <x>-53</x>
@@ -4860,8 +4874,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1006</x>
-     <y>354</y>
+     <x>1133</x>
+     <y>327</y>
     </hint>
     <hint type="destinationlabel">
      <x>-47</x>
@@ -4876,8 +4890,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1000</x>
-     <y>387</y>
+     <x>1133</x>
+     <y>360</y>
     </hint>
     <hint type="destinationlabel">
      <x>-41</x>
@@ -4892,8 +4906,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>998</x>
-     <y>424</y>
+     <x>1133</x>
+     <y>393</y>
     </hint>
     <hint type="destinationlabel">
      <x>-75</x>
@@ -4908,8 +4922,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1005</x>
-     <y>463</y>
+     <x>1133</x>
+     <y>426</y>
     </hint>
     <hint type="destinationlabel">
      <x>-41</x>
@@ -4924,8 +4938,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>998</x>
-     <y>493</y>
+     <x>1133</x>
+     <y>459</y>
     </hint>
     <hint type="destinationlabel">
      <x>-40</x>
@@ -4940,8 +4954,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>195</y>
+     <x>1119</x>
+     <y>162</y>
     </hint>
     <hint type="destinationlabel">
      <x>-137</x>
@@ -4956,8 +4970,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>238</y>
+     <x>1119</x>
+     <y>195</y>
     </hint>
     <hint type="destinationlabel">
      <x>-98</x>
@@ -4972,8 +4986,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>271</y>
+     <x>1119</x>
+     <y>228</y>
     </hint>
     <hint type="destinationlabel">
      <x>-249</x>
@@ -4988,8 +5002,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>304</y>
+     <x>1119</x>
+     <y>261</y>
     </hint>
     <hint type="destinationlabel">
      <x>-292</x>
@@ -5004,8 +5018,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>337</y>
+     <x>1119</x>
+     <y>294</y>
     </hint>
     <hint type="destinationlabel">
      <x>-209</x>
@@ -5020,8 +5034,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>370</y>
+     <x>1119</x>
+     <y>327</y>
     </hint>
     <hint type="destinationlabel">
      <x>-207</x>
@@ -5036,8 +5050,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>403</y>
+     <x>1119</x>
+     <y>360</y>
     </hint>
     <hint type="destinationlabel">
      <x>-178</x>
@@ -5052,8 +5066,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>436</y>
+     <x>1119</x>
+     <y>393</y>
     </hint>
     <hint type="destinationlabel">
      <x>-162</x>
@@ -5068,8 +5082,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>469</y>
+     <x>1119</x>
+     <y>426</y>
     </hint>
     <hint type="destinationlabel">
      <x>-303</x>
@@ -5084,8 +5098,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>502</y>
+     <x>1119</x>
+     <y>459</y>
     </hint>
     <hint type="destinationlabel">
      <x>-175</x>
@@ -5100,8 +5114,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>535</y>
+     <x>1119</x>
+     <y>492</y>
     </hint>
     <hint type="destinationlabel">
      <x>-193</x>
@@ -5116,8 +5130,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>568</y>
+     <x>1119</x>
+     <y>525</y>
     </hint>
     <hint type="destinationlabel">
      <x>-147</x>
@@ -5132,8 +5146,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>601</y>
+     <x>1119</x>
+     <y>558</y>
     </hint>
     <hint type="destinationlabel">
      <x>-49</x>
@@ -5148,8 +5162,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>634</y>
+     <x>1119</x>
+     <y>591</y>
     </hint>
     <hint type="destinationlabel">
      <x>-191</x>
@@ -5164,8 +5178,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>667</y>
+     <x>1119</x>
+     <y>624</y>
     </hint>
     <hint type="destinationlabel">
      <x>-225</x>
@@ -5180,8 +5194,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>700</y>
+     <x>1119</x>
+     <y>657</y>
     </hint>
     <hint type="destinationlabel">
      <x>-92</x>
@@ -5196,8 +5210,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>733</y>
+     <x>1119</x>
+     <y>690</y>
     </hint>
     <hint type="destinationlabel">
      <x>-88</x>
@@ -5212,8 +5226,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1003</x>
-     <y>766</y>
+     <x>1119</x>
+     <y>723</y>
     </hint>
     <hint type="destinationlabel">
      <x>-139</x>
@@ -5228,8 +5242,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>985</x>
-     <y>188</y>
+     <x>1133</x>
+     <y>162</y>
     </hint>
     <hint type="destinationlabel">
      <x>-252</x>
@@ -5244,8 +5258,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>989</x>
-     <y>221</y>
+     <x>1133</x>
+     <y>195</y>
     </hint>
     <hint type="destinationlabel">
      <x>-258</x>
@@ -5260,8 +5274,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>985</x>
-     <y>259</y>
+     <x>1133</x>
+     <y>228</y>
     </hint>
     <hint type="destinationlabel">
      <x>-222</x>
@@ -5276,8 +5290,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>991</x>
-     <y>290</y>
+     <x>1133</x>
+     <y>261</y>
     </hint>
     <hint type="destinationlabel">
      <x>-200</x>
@@ -5292,8 +5306,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>989</x>
-     <y>327</y>
+     <x>1133</x>
+     <y>294</y>
     </hint>
     <hint type="destinationlabel">
      <x>-308</x>
@@ -5308,8 +5322,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>992</x>
-     <y>353</y>
+     <x>1133</x>
+     <y>327</y>
     </hint>
     <hint type="destinationlabel">
      <x>1684</x>
@@ -5324,8 +5338,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>996</x>
-     <y>397</y>
+     <x>1133</x>
+     <y>360</y>
     </hint>
     <hint type="destinationlabel">
      <x>1671</x>
@@ -5340,8 +5354,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>991</x>
-     <y>432</y>
+     <x>1133</x>
+     <y>393</y>
     </hint>
     <hint type="destinationlabel">
      <x>1642</x>
@@ -5356,8 +5370,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>993</x>
-     <y>456</y>
+     <x>1133</x>
+     <y>426</y>
     </hint>
     <hint type="destinationlabel">
      <x>1670</x>
@@ -5372,8 +5386,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>995</x>
-     <y>490</y>
+     <x>1133</x>
+     <y>459</y>
     </hint>
     <hint type="destinationlabel">
      <x>1638</x>
@@ -5388,8 +5402,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>992</x>
-     <y>520</y>
+     <x>1133</x>
+     <y>492</y>
     </hint>
     <hint type="destinationlabel">
      <x>1645</x>
@@ -5404,8 +5418,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>992</x>
-     <y>561</y>
+     <x>1133</x>
+     <y>525</y>
     </hint>
     <hint type="destinationlabel">
      <x>1617</x>
@@ -5420,8 +5434,8 @@
    <slot>doHelp()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>1001</x>
-     <y>589</y>
+     <x>1133</x>
+     <y>558</y>
     </hint>
     <hint type="destinationlabel">
      <x>1698</x>
@@ -5436,8 +5450,8 @@
    <slot>doRefine()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>448</x>
-     <y>194</y>
+     <x>472</x>
+     <y>161</y>
     </hint>
     <hint type="destinationlabel">
      <x>-94</x>
@@ -5452,8 +5466,8 @@
    <slot>doRefine()</slot>
    <hints>
     <hint type="sourcelabel">
-     <x>390</x>
-     <y>196</y>
+     <x>424</x>
+     <y>161</y>
     </hint>
     <hint type="destinationlabel">
      <x>-202</x>
@@ -5461,70 +5475,6 @@
     </hint>
    </hints>
   </connection>
-  <connection>
-   <sender>ttcp1_button</sender>
-   <signal>clicked()</signal>
-   <receiver>EditTandemPresetView</receiver>
-   <slot>doHelp()</slot>
-   <hints>
-    <hint type="sourcelabel">
-     <x>978</x>
-     <y>482</y>
-    </hint>
-    <hint type="destinationlabel">
-     <x>-134</x>
-     <y>465</y>
-    </hint>
-   </hints>
-  </connection>
-  <connection>
-   <sender>ttcp4_button</sender>
-   <signal>clicked()</signal>
-   <receiver>EditTandemPresetView</receiver>
-   <slot>doHelp()</slot>
-   <hints>
-    <hint type="sourcelabel">
-     <x>974</x>
-     <y>578</y>
-    </hint>
-    <hint type="destinationlabel">
-     <x>-132</x>
-     <y>672</y>
-    </hint>
-   </hints>
-  </connection>
-  <connection>
-   <sender>ttcp3_button</sender>
-   <signal>clicked()</signal>
-   <receiver>EditTandemPresetView</receiver>
-   <slot>doHelp()</slot>
-   <hints>
-    <hint type="sourcelabel">
-     <x>988</x>
-     <y>551</y>
-    </hint>
-    <hint type="destinationlabel">
-     <x>-104</x>
-     <y>644</y>
-    </hint>
-   </hints>
-  </connection>
-  <connection>
-   <sender>ttcp2_button</sender>
-   <signal>clicked()</signal>
-   <receiver>EditTandemPresetView</receiver>
-   <slot>doHelp()</slot>
-   <hints>
-    <hint type="sourcelabel">
-     <x>970</x>
-     <y>516</y>
-    </hint>
-    <hint type="destinationlabel">
-     <x>-67</x>
-     <y>559</y>
-    </hint>
-   </hints>
-  </connection>
  </connections>
  <slots>
   <slot>doCopy()</slot>
@@ -5539,37 +5489,37 @@
   <slot>doRefine()</slot>
  </slots>
  <buttongroups>
-  <buttongroup name="buttonGroup"/>
-  <buttongroup name="sunlw_button_group"/>
-  <buttongroup name="rpm_button_group"/>
-  <buttongroup name="sci_button_group"/>
-  <buttongroup name="spmmeu_button_group"/>
+  <buttongroup name="suca_button_group"/>
+  <buttongroup name="ospec_button_group"/>
   <buttongroup name="buttonGroup_2"/>
-  <buttongroup name="pqa_button_group"/>
-  <buttongroup name="spmmie_button_group"/>
+  <buttongroup name="sci_button_group"/>
   <buttongroup name="oresu_button_group"/>
-  <buttongroup name="sbi_button_group"/>
-  <buttongroup name="syi_button_group"/>
-  <buttongroup name="rcsemi_button_group"/>
-  <buttongroup name="sxi_button_group"/>
+  <buttongroup name="buttonGroup_4"/>
   <buttongroup name="sai_button_group"/>
-  <buttongroup name="buttonGroup_3"/>
-  <buttongroup name="pcsemi_button_group"/>
-  <buttongroup name="pstpb_button_group"/>
-  <buttongroup name="rupmffr_button_group"/>
-  <buttongroup name="ospec_button_group"/>
-  <buttongroup name="suca_button_group"/>
+  <buttongroup name="rpm_button_group"/>
+  <buttongroup name="spmmie_button_group"/>
   <buttongroup name="buttonGroup_7"/>
-  <buttongroup name="buttonGroup_4"/>
+  <buttongroup name="spmmeu_button_group"/>
+  <buttongroup name="pqa_button_group"/>
+  <buttongroup name="rupmffr_button_group"/>
+  <buttongroup name="pstpb_button_group"/>
+  <buttongroup name="szi_button_group"/>
+  <buttongroup name="rcsemi_button_group"/>
+  <buttongroup name="sbi_button_group"/>
+  <buttongroup name="sir_button_group"/>
+  <buttongroup name="buttonGroup_6"/>
   <buttongroup name="scp_button_group"/>
-  <buttongroup name="ruc_button_group"/>
-  <buttongroup name="rss_button_group"/>
   <buttongroup name="sfmmeu_button_group"/>
-  <buttongroup name="buttonGroup_6"/>
+  <buttongroup name="buttonGroup"/>
+  <buttongroup name="refine_button_group"/>
   <buttongroup name="pqp_button_group"/>
+  <buttongroup name="pcsemi_button_group"/>
   <buttongroup name="buttonGroup_5"/>
-  <buttongroup name="sir_button_group"/>
-  <buttongroup name="szi_button_group"/>
-  <buttongroup name="refine_button_group"/>
+  <buttongroup name="ruc_button_group"/>
+  <buttongroup name="syi_button_group"/>
+  <buttongroup name="sxi_button_group"/>
+  <buttongroup name="rss_button_group"/>
+  <buttongroup name="sunlw_button_group"/>
+  <buttongroup name="buttonGroup_3"/>
  </buttongroups>
 </ui>
diff --git a/src/gui/edit/edit_tandem_preset_dialog/edittandempresetdialog.cpp b/src/gui/edit/edit_tandem_preset_dialog/edittandempresetdialog.cpp
index 4d5309468d51f628d3070225034926e71fb27e6d..1216c96eb7ba66fee4f0f7bd28442db72495ed84 100644
--- a/src/gui/edit/edit_tandem_preset_dialog/edittandempresetdialog.cpp
+++ b/src/gui/edit/edit_tandem_preset_dialog/edittandempresetdialog.cpp
@@ -38,6 +38,7 @@
 #include <QDir>
 #include <QFileDialog>
 #include <QMessageBox>
+#include <QInputDialog>
 
 
 EditTandemPresetDialog::EditTandemPresetDialog(QWidget *parent)
@@ -99,6 +100,7 @@ EditTandemPresetDialog::setTandemParametersFile(
         this, tr("Error"), tr("Error :\n %1").arg(error.qwhat()));
     }
 
+  fillPresetDirectoryLabel();
   fillPresetComboBox();
   populate();
 }
@@ -115,6 +117,7 @@ EditTandemPresetDialog::newTandemParameters(
 
   _p_tandem_preset_file =
     new TandemParametersFile(QString("%1/temp.xml").arg(_preset_directory));
+  fillPresetDirectoryLabel();
   fillPresetComboBox();
   populate();
 }
@@ -123,7 +126,23 @@ EditTandemPresetDialog::newTandemParameters(
 void
 EditTandemPresetDialog::doCopy()
 {
-  ui->method_name_line_edit->setText("untitled");
+  bool ok;
+  QString new_preset_file_name =
+    QInputDialog::getText(this,
+                          tr("Preset file name"),
+                          tr("Choose the new preset file name:"),
+                          QLineEdit::Normal,
+                          "untitled",
+                          &ok);
+  if(ok && !new_preset_file_name.isEmpty())
+    {
+      ui->method_name_label->setText(tr("%1 loaded").arg(new_preset_file_name));
+    }
+  else
+    {
+      return;
+    }
+
   readUi();
   if(_p_tandem_preset_file == nullptr)
     {
@@ -135,8 +154,8 @@ EditTandemPresetDialog::doCopy()
     {
       delete _p_tandem_preset_file;
     }
-  _p_tandem_preset_file =
-    new TandemParametersFile(QString("%1/untitled.xml").arg(_preset_directory));
+  _p_tandem_preset_file = new TandemParametersFile(
+    QString("%1/%2.xml").arg(_preset_directory).arg(new_preset_file_name));
 }
 
 
@@ -160,6 +179,7 @@ EditTandemPresetDialog::doSelectDir()
                   .arg(my_dir.absoluteFilePath()));
             }
           _preset_directory = directory;
+          fillPresetDirectoryLabel();
           fillPresetComboBox();
         }
     }
@@ -281,6 +301,7 @@ EditTandemPresetDialog::fillPresetComboBox()
   int index = ui->preset_combo_box->findText(default_preset_name);
   if(index != -1)
     { // -1 for not found
+      ui->pushButton_5->setEnabled(true);
       ui->preset_combo_box->setCurrentIndex(index);
     }
 }
@@ -649,10 +670,9 @@ EditTandemPresetDialog::doHelp()
     {
       html_doc.setFileName(":/tandem/resources/html_doc/oxp.html");
     }
-  if((senderObjName == "ttcp1_button") || (senderObjName == "ttcp2_button") ||
-     (senderObjName == "ttcp3_button") || (senderObjName == "ttcp4_button"))
+  if(senderObjName == "ttfparam_button")
     {
-      html_doc.setFileName(":/tandem/resources/html_doc/ttcp.html");
+      html_doc.setFileName(":/tandem/resources/html_doc/ttfparam.html");
     }
 
   if(html_doc.open(QFile::ReadOnly | QFile::Text))
@@ -673,7 +693,11 @@ EditTandemPresetDialog::readUi()
 {
   try
     {
-      _tandem_params.setMethodName(ui->method_name_line_edit->text());
+      // remove the loaded from the method name in the label
+      QString temp_preset_name = ui->method_name_label->text();
+      temp_preset_name.truncate(temp_preset_name.lastIndexOf(" loaded"));
+      _tandem_params.setMethodName(temp_preset_name);
+
       _tandem_params.setParamLabelValue(
         "spectrum, parent monoisotopic mass error units", "Daltons");
       if(ui->spmmeu_ppm_radio_button->isChecked())
@@ -747,6 +771,8 @@ EditTandemPresetDialog::readUi()
       _tandem_params.setParamLabelValue("spectrum, threads",
                                         ui->st_edit->text());
 
+      _tandem_params.setParamLabelValue("spectrum, timstof MS2 filters",
+                                        ui->ttfparam_edit->text());
 
       _tandem_params.setParamLabelValue("protein, cleavage site",
                                         ui->pcs_edit->text());
@@ -923,12 +949,6 @@ EditTandemPresetDialog::readUi()
 
       _tandem_params.setParamLabelValue("output, xsl path",
                                         ui->oxp_edit->text());
-      if(ui->centroid_group_box->isChecked())
-        {
-          QString centroid_parameters = createCentroidParameter();
-          _tandem_params.setParamLabelValue(
-            "spectrum, timstof MS2 centroid parameters", centroid_parameters);
-        }
     }
   catch(pappso::PappsoException &error)
     {
@@ -942,7 +962,11 @@ EditTandemPresetDialog::populate()
   qDebug() << __FILE__ << " " << __FUNCTION__ << " " << __LINE__;
   try
     {
-      ui->method_name_line_edit->setText(_tandem_params.getMethodName());
+      if(!_tandem_params.getMethodName().isEmpty())
+        {
+          ui->method_name_label->setText(
+            tr("%1 loaded").arg(_tandem_params.getMethodName()));
+        }
       /*
        * <note type="input" label="spectrum, parent monoisotopic mass error
        * units">ppm</note>
@@ -1084,6 +1108,8 @@ EditTandemPresetDialog::populate()
       //<note type="input" label="spectrum, threads">1</note>
       ui->st_edit->setText(_tandem_params.getValue("spectrum, threads"));
 
+      ui->ttfparam_edit->setText(
+        _tandem_params.getValue("spectrum, timstof MS2 filters"));
 
       //<note type="input" label="protein, cleavage site">[RK]|{P}</note>
       ui->pcs_edit->setText(_tandem_params.getValue("protein, cleavage site"));
@@ -1508,26 +1534,6 @@ EditTandemPresetDialog::populate()
       //<note type="input" label="output, path hashing">no</note>
       //<note type="input" label="output, xsl path">tandem-style.xsl</note>
       ui->oxp_edit->setText(_tandem_params.getValue("output, xsl path"));
-
-      try
-        {
-          QStringList centroid_parameters =
-            _tandem_params.getValue("spectrum, timstof MS2 centroid parameters")
-              .split(" ");
-          ui->instru_res_line->setText(centroid_parameters.at(0));
-          ui->smwi_line->setText(centroid_parameters.at(1));
-          ui->intwi_line->setText(centroid_parameters.at(2));
-          ui->intthre_line->setText(centroid_parameters.at(3));
-          ui->centroid_group_box->setChecked(true);
-        }
-      catch(pappso::ExceptionNotFound &error)
-        {
-          ui->instru_res_line->setText("20000");
-          ui->smwi_line->setText("2.0");
-          ui->intwi_line->setText("4");
-          ui->intthre_line->setText("10.0");
-          ui->centroid_group_box->setChecked(false);
-        }
     }
   catch(pappso::ExceptionNotFound &error)
     {
@@ -1548,12 +1554,25 @@ EditTandemPresetDialog::done(int r)
       readUi();
       if(!_p_tandem_preset_file->exists())
         {
-          QMessageBox::warning(
+          int ok = QMessageBox::warning(
             this,
             tr("Save parameters"),
-            tr("Parameters file does not exists.\nPlease save it before "
-               "pressing ok or cancel edition"));
-          return;
+            tr("Parameters file does not exist.\nDo you want to save a file "
+               "named %1")
+              .arg(_p_tandem_preset_file->getMethodName()),
+            QMessageBox::Cancel,
+            QMessageBox::Save);
+
+          if(ok == QMessageBox::Cancel)
+            {
+              return;
+            }
+          else if(ok == QMessageBox::Save)
+            {
+              doSave();
+              QDialog::done(r);
+              return;
+            }
         }
       TandemParameters ref_params =
         _p_tandem_preset_file->getTandemParameters();
@@ -1564,12 +1583,25 @@ EditTandemPresetDialog::done(int r)
         }
       else
         {
-          QMessageBox::warning(
-            this,
-            tr("Save parameters"),
-            tr("Parameters modified but not saved.\nPlease save it before "
-               "pressing ok or cancel edition"));
-          return;
+          int ok =
+            QMessageBox::warning(this,
+                                 tr("Save parameters"),
+                                 tr("Parameters modified but not saved in the "
+                                    "file %1.\nDo you want to save it ?")
+                                   .arg(_p_tandem_preset_file->getMethodName()),
+                                 QMessageBox::Cancel,
+                                 QMessageBox::Save);
+
+          if(ok == QMessageBox::Cancel)
+            {
+              return;
+            }
+          else if(ok == QMessageBox::Save)
+            {
+              doSave();
+              QDialog::done(r);
+              return;
+            }
         }
     }
   else // cancel, close or exc was pressed
@@ -1579,30 +1611,18 @@ EditTandemPresetDialog::done(int r)
     }
 }
 
-QString
-EditTandemPresetDialog::createCentroidParameter()
+void
+EditTandemPresetDialog::fillPresetDirectoryLabel()
 {
-  QString centroid_parameter;
-  bool instru_bool;
-  ui->instru_res_line->text().toDouble(&instru_bool);
-  bool intwi_bool;
-  ui->intwi_line->text().toDouble(&intwi_bool);
-  bool smowi_bool;
-  ui->smwi_line->text().toDouble(&smowi_bool);
-  bool intthre_bool;
-  ui->intthre_line->text().toDouble(&intthre_bool);
-  if(instru_bool && intwi_bool && smowi_bool && intthre_bool)
-    {
-      centroid_parameter =
-        ui->instru_res_line->text() + " " + ui->smwi_line->text() + " " +
-        ui->intwi_line->text() + " " + ui->intthre_line->text();
-    }
-  else
+  if(!_preset_directory.isEmpty())
     {
-      throw pappso::PappsoException(
-        tr("At least one of the centroid parameters hasn't right format\n Must "
-           "be Integer or "
-           "Double\nPlease refer to the help page"));
+      if(QFileInfo(_preset_directory).exists() &&
+         QFileInfo(_preset_directory).isDir())
+        {
+          ui->label_loaded_directory->setText(
+            tr("%1 directory selected").arg(_preset_directory));
+          ui->preset_combo_box->setEnabled(true);
+          ui->pushButton->setEnabled(true);
+        }
     }
-  return centroid_parameter;
 }
diff --git a/src/gui/edit/edit_tandem_preset_dialog/edittandempresetdialog.h b/src/gui/edit/edit_tandem_preset_dialog/edittandempresetdialog.h
index cbe59cdcecc33cab4b57f4e90dcf339dc58abd3c..842f8ab106463b273cef556d75bf0b4ad6304a4f 100644
--- a/src/gui/edit/edit_tandem_preset_dialog/edittandempresetdialog.h
+++ b/src/gui/edit/edit_tandem_preset_dialog/edittandempresetdialog.h
@@ -56,7 +56,6 @@ class EditTandemPresetDialog : public QDialog
 
   public slots:
   void doHelp();
-  void doSave();
   void doCopy();
   void doEdit(QString value);
   void doResultType();
@@ -65,10 +64,11 @@ class EditTandemPresetDialog : public QDialog
   void doSelectDir();
 
   private:
+  void doSave();
   void fillPresetComboBox();
+  void fillPresetDirectoryLabel();
   void populate();
   void readUi();
-  QString createCentroidParameter();
 
   private:
   Ui::EditTandemPresetView *ui;
diff --git a/src/gui/lists/ms_identification_run_list_view/msidentificationlistwindow.cpp b/src/gui/lists/ms_identification_run_list_view/msidentificationlistwindow.cpp
index 3981fb95722f77f4a0a5b7cab7c191847473bf91..90206ab1c67b16c04c71ae3a54f13fea5e009edc 100644
--- a/src/gui/lists/ms_identification_run_list_view/msidentificationlistwindow.cpp
+++ b/src/gui/lists/ms_identification_run_list_view/msidentificationlistwindow.cpp
@@ -43,17 +43,10 @@ MsIdentificationListQActionColumn::MsIdentificationListQActionColumn(
   m_column           = column;
   m_msid_list_window = parent;
 
-#if QT_VERSION >= 0x050000
-  // Qt5 code
   connect(this,
           &MsIdentificationListQActionColumn::toggled,
           this,
           &MsIdentificationListQActionColumn::doToggled);
-
-#else
-  // Qt4 code
-  connect(this, SIGNAL(toggled(bool)), this, SLOT(doToggled(bool)));
-#endif
 }
 
 MsIdentificationListQActionColumn::~MsIdentificationListQActionColumn()
@@ -80,12 +73,14 @@ MsIdentificationListWindow::MsIdentificationListWindow(ProjectWindow *parent)
   ui->setupUi(this);
   setWindowIcon(QIcon(":/xtpcpp_icon/resources/xtandempipeline_icon.svg"));
 
+  // Set Window title based on project name
   if(mp_projectWindow->getProjectP() != nullptr)
     {
       setWindowTitle(QString("%1 - Ms Identification list")
                        .arg(mp_projectWindow->getProjectP()->getProjectName()));
     }
 
+  // Configure the dynamic table
   mp_msidTableModel =
     new MsIdentificationTableModel(this, mp_projectWindow->getProjectP());
 
@@ -97,7 +92,7 @@ MsIdentificationListWindow::MsIdentificationListWindow(ProjectWindow *parent)
   ui->tableView->setSortingEnabled(true);
   ui->tableView->horizontalHeader()->setSectionsMovable(true);
 
-
+  // Add the col name to the hide/show menu
   MsIdentificationListQActionColumn *p_action;
   for(int i = 0; i < mp_msidTableModel->columnCount(); i++)
     {
@@ -106,6 +101,10 @@ MsIdentificationListWindow::MsIdentificationListWindow(ProjectWindow *parent)
       ui->menuColumns->addAction(p_action);
     }
 
+  // Create the copying path menu
+  mp_copyPathMenu = new QMenu();
+
+  // Handle signals/slots
   connect(this,
           &MsIdentificationListWindow::MsIdentificationDataChanged,
           mp_msidTableModel,
@@ -138,6 +137,10 @@ MsIdentificationListWindow::MsIdentificationListWindow(ProjectWindow *parent)
           &QAction::triggered,
           mp_projectWindow,
           &ProjectWindow::doOpenMassChroQDialog);
+  connect(mp_copyPathMenu,
+          &QMenu::triggered,
+          this,
+          &MsIdentificationListWindow::doCopyPath);
 }
 
 
@@ -189,10 +192,13 @@ MsIdentificationListWindow::onMsIdentificationSearchEdit(
 void
 MsIdentificationListWindow::showGroupsContextMenu(const QPoint &pos)
 {
-  QModelIndex index = ui->tableView->indexAt(pos);
+  QModelIndex corrected_index =
+    mp_proxyModel->mapToSource(ui->tableView->indexAt(pos));
 
-  qDebug() << "check the column" << index.column();
-  if(index.column() == (std::int8_t)msIdentificationListColumn::align_groups)
+  qDebug() << "check the column" << corrected_index.column();
+  // Handle Alignement Groups
+  if(corrected_index.column() ==
+     (std::int8_t)msIdentificationListColumn::align_groups)
     {
       if(mp_groups_context_menu == nullptr)
         {
@@ -205,8 +211,83 @@ MsIdentificationListWindow::showGroupsContextMenu(const QPoint &pos)
           mp_groups_context_menu->exec(QCursor::pos());
         }
     }
+
+  // Handle the file path copy to clipboard
+  if(corrected_index.column() ==
+       (std::int8_t)msIdentificationListColumn::id_file ||
+     corrected_index.column() == (std::int8_t)msIdentificationListColumn::mzML)
+    {
+      mp_copyPathMenu->clear();
+      QAction *copy_action =
+        new QAction(QIcon::fromTheme("edit-copy"), "copy path");
+      mp_copyPathMenu->addAction(copy_action);
+      m_askIndex = corrected_index;
+      mp_copyPathMenu->exec(QCursor::pos());
+    }
+
+  // Handle multiple path copy to clipboard
+  if(corrected_index.column() ==
+     (std::int8_t)msIdentificationListColumn::fasta_file)
+    {
+      mp_copyPathMenu->clear();
+      QMenu *copy_menu = new QMenu("copy path");
+      copy_menu->setIcon(QIcon::fromTheme("edit-copy"));
+      std::vector<FastaFileSp> fasta_list =
+        mp_msidTableModel->getIdentificationDataSourceSpList()
+          .at(corrected_index.row())
+          ->getFastaFileList();
+
+      for(FastaFileSp fasta_file : fasta_list)
+        {
+          copy_menu->addAction(QString("%1").arg(fasta_file->getFilename()));
+        }
+      mp_copyPathMenu->addMenu(copy_menu);
+
+      m_askIndex = corrected_index;
+      mp_copyPathMenu->exec(QCursor::pos());
+    }
 }
 
+void
+MsIdentificationListWindow::doCopyPath(QAction *action)
+{
+  QString path;
+  if(action->text() == "copy path")
+    {
+
+      if(m_askIndex.column() ==
+         (std::int8_t)msIdentificationListColumn::id_file)
+        {
+          path = mp_msidTableModel->getIdentificationDataSourceSpList()
+                   .at(m_askIndex.row())
+                   ->getResourceName();
+        }
+      if(m_askIndex.column() == (std::int8_t)msIdentificationListColumn::mzML)
+        {
+          path = mp_msidTableModel->getIdentificationDataSourceSpList()
+                   .at(m_askIndex.row())
+                   ->getMsRunSp()
+                   ->getFileName();
+        }
+    }
+  else // fasta file path asked to be copied
+    {
+      std::vector<FastaFileSp> fasta_list =
+        mp_msidTableModel->getIdentificationDataSourceSpList()
+          .at(m_askIndex.row())
+          ->getFastaFileList();
+      for(FastaFileSp fasta_file : fasta_list)
+        {
+          if(fasta_file->getFilename() == action->text())
+            {
+              path = fasta_file->getAbsoluteFilePath();
+            }
+        }
+    }
+  qDebug() << path << "copied";
+  QClipboard *clipboard = QGuiApplication::clipboard();
+  clipboard->setText(path);
+}
 
 void
 MsIdentificationListWindow::updateStatusBar()
diff --git a/src/gui/lists/ms_identification_run_list_view/msidentificationlistwindow.h b/src/gui/lists/ms_identification_run_list_view/msidentificationlistwindow.h
index 682c5df7121f0fde34558baf642abd16019ef13f..63cf200d329ac3f96a0c14de47bbb7430117f9a4 100644
--- a/src/gui/lists/ms_identification_run_list_view/msidentificationlistwindow.h
+++ b/src/gui/lists/ms_identification_run_list_view/msidentificationlistwindow.h
@@ -86,7 +86,7 @@ class MsIdentificationListWindow : public QMainWindow
   public slots:
   void doExportAsOdsFile();
   void doProjectNameChanged(QString name);
-
+  void doCopyPath(QAction *action);
 
   signals:
   void MsIdentificationDataChanged();
@@ -98,7 +98,8 @@ class MsIdentificationListWindow : public QMainWindow
   void updateStatusBar();
   void onMsIdentificationSearchEdit(QString protein_search_string);
   void showGroupsContextMenu(const QPoint &);
-
+  
+  
   protected:
   void askEngineDetailView(IdentificationDataSourceSp *identificationEngine);
 
@@ -109,4 +110,6 @@ class MsIdentificationListWindow : public QMainWindow
   MassChroqRunDialog *mp_export_masschroq_dialog = nullptr;
   ProjectWindow *mp_projectWindow;
   AlignmentGroupsQMenu *mp_groups_context_menu = nullptr;
+  QMenu *mp_copyPathMenu = nullptr;
+  QModelIndex m_askIndex;
 };
diff --git a/src/gui/lists/ms_identification_run_list_view/msidentificationtablemodel.cpp b/src/gui/lists/ms_identification_run_list_view/msidentificationtablemodel.cpp
index ca233dd3ae7128afcbc446d22c595e31fbf05a0e..bff273b65feaf24bb540ad41fcfe239dc40fb32f 100644
--- a/src/gui/lists/ms_identification_run_list_view/msidentificationtablemodel.cpp
+++ b/src/gui/lists/ms_identification_run_list_view/msidentificationtablemodel.cpp
@@ -128,6 +128,9 @@ MsIdentificationTableModel::getTitle(std::int8_t column)
       case(std::int8_t)msIdentificationListColumn::engine_name:
         return "Identification engine";
         break;
+      case(std::int8_t)msIdentificationListColumn::fasta_file:
+        return "Fasta file(s)";
+        break;
       case(std::int8_t)msIdentificationListColumn::nbr_spectrum:
         return "Total spectra used";
         break;
@@ -188,6 +191,9 @@ MsIdentificationTableModel::getDescription(std::int8_t column)
       case(std::int8_t)msIdentificationListColumn::engine_name:
         return "Engine Name";
         break;
+      case(std::int8_t)msIdentificationListColumn::fasta_file:
+        return "Fasta files used in identification";
+        break;
       case(std::int8_t)msIdentificationListColumn::nbr_spectrum:
         return "Number of Spectrum";
         break;
@@ -346,6 +352,24 @@ MsIdentificationTableModel::data(const QModelIndex &index, int role) const
                             m_identificationDataSourceSpList.at(row)
                               ->getIdentificationEngineVersion());
           }
+        if(col == (std::int8_t)msIdentificationListColumn::fasta_file)
+          {
+            std::vector<FastaFileSp> fasta_list =
+              m_identificationDataSourceSpList.at(row)->getFastaFileList();
+            if(fasta_list.size() == 1)
+              {
+                return QVariant(fasta_list.front()->getFilename());
+              }
+            else if(fasta_list.size() == 0)
+              {
+                return QVariant("No fasta file used");
+              }
+            else // more than one fasta file listed
+              {
+                return QVariant(QString::number(fasta_list.size()) +
+                                " fasta used");
+              }
+          }
         if(col == (std::int8_t)msIdentificationListColumn::id_msrun_id)
           {
             return QVariant(m_identificationDataSourceSpList.at(row)
@@ -431,6 +455,17 @@ MsIdentificationTableModel::data(const QModelIndex &index, int role) const
                               .get()
                               ->getFileName());
           }
+        if(col == (std::int8_t)msIdentificationListColumn::fasta_file)
+          {
+            std::vector<FastaFileSp> fasta_list =
+              m_identificationDataSourceSpList.at(row)->getFastaFileList();
+            QString tool_tip;
+            for(FastaFileSp fasta_file : fasta_list)
+              {
+                tool_tip += fasta_file->getAbsoluteFilePath() + "\n";
+              }
+            return QVariant(tool_tip);
+          }
         return QVariant();
 
       case Qt::DecorationRole:
diff --git a/src/gui/lists/ms_identification_run_list_view/msidentificationtablemodel.h b/src/gui/lists/ms_identification_run_list_view/msidentificationtablemodel.h
index c843159fa762e6e13b86a856db676ec879a6822a..d9c535cd5bc5b48213f48e51b5c30ca457f3604e 100644
--- a/src/gui/lists/ms_identification_run_list_view/msidentificationtablemodel.h
+++ b/src/gui/lists/ms_identification_run_list_view/msidentificationtablemodel.h
@@ -42,18 +42,19 @@ enum class msIdentificationListColumn : std::int8_t
   id_file        = 2,  ///< file ID
   mzML           = 3,  ///< accession
   engine_name    = 4,  ///< engine name
-  nbr_spectrum   = 5,  ///< number of spectrum
-  nbr_peptide    = 6,  ///< number of peptide identified
-  nbr_unique     = 7,  ///< number of unique spectra
-  percent_assign = 8,  ///< percent of assignation
-  id_msrun_id    = 9,  ///< identification of MsRunId
-  nb_ms_1        = 10, ///< number of ms1
-  nb_ms_2        = 11, ///< number of ms2
-  nb_ms_3        = 12, ///< number of ms3
-  nb_tic_1       = 13, ///< number of TIC 1
-  nb_tic_2       = 14, ///< number of TIC 2
-  nb_tic_3       = 15, ///< number of TIC 3
-  last           = 16, ///< get list size
+  fasta_file     = 5,  ///< fasta files
+  nbr_spectrum   = 6,  ///< number of spectrum
+  nbr_peptide    = 7,  ///< number of peptide identified
+  nbr_unique     = 8,  ///< number of unique spectra
+  percent_assign = 9,  ///< percent of assignation
+  id_msrun_id    = 10, ///< identification of MsRunId
+  nb_ms_1        = 11, ///< number of ms1
+  nb_ms_2        = 12, ///< number of ms2
+  nb_ms_3        = 13, ///< number of ms3
+  nb_tic_1       = 14, ///< number of TIC 1
+  nb_tic_2       = 15, ///< number of TIC 2
+  nb_tic_3       = 16, ///< number of TIC 3
+  last           = 17, ///< get list size
 };
 
 class MsIdentificationListWindow;
diff --git a/src/gui/widgets/engines_view/xtandem_view_widget.ui b/src/gui/widgets/engines_view/xtandem_view_widget.ui
index a1c852b4f8d2a615d296c18e685b44d7d46ae17a..f3ee326d766cb53fa6dae07cff2a7f78e04c0d0a 100644
--- a/src/gui/widgets/engines_view/xtandem_view_widget.ui
+++ b/src/gui/widgets/engines_view/xtandem_view_widget.ui
@@ -36,9 +36,9 @@
       <property name="geometry">
        <rect>
         <x>0</x>
-        <y>0</y>
+        <y>-142</y>
         <width>783</width>
-        <height>641</height>
+        <height>674</height>
        </rect>
       </property>
       <attribute name="label">
@@ -47,6 +47,16 @@
       <layout class="QGridLayout" name="gridLayout_2">
        <item row="0" column="0">
         <layout class="QGridLayout" name="gridLayout_6">
+         <item row="18" column="1">
+          <widget class="QLineEdit" name="setNumberOfThreadsLineEdit">
+           <property name="alignment">
+            <set>Qt::AlignRight|Qt::AlignTrailing|Qt::AlignVCenter</set>
+           </property>
+           <property name="readOnly">
+            <bool>true</bool>
+           </property>
+          </widget>
+         </item>
          <item row="2" column="2">
           <widget class="QToolButton" name="spmmep_push_button">
            <property name="autoFillBackground">
@@ -79,16 +89,6 @@
            </property>
           </widget>
          </item>
-         <item row="18" column="1">
-          <widget class="QLineEdit" name="setNumberOfThreadsLineEdit">
-           <property name="alignment">
-            <set>Qt::AlignRight|Qt::AlignTrailing|Qt::AlignVCenter</set>
-           </property>
-           <property name="readOnly">
-            <bool>true</bool>
-           </property>
-          </widget>
-         </item>
          <item row="16" column="1">
           <widget class="QLineEdit" name="alterHowProteinSequencesAreRetrievedFromFASTAFilesLineEdit">
            <property name="alignment">
@@ -975,6 +975,36 @@
            </property>
           </widget>
          </item>
+         <item row="19" column="0">
+          <widget class="QLabel" name="label">
+           <property name="text">
+            <string>TimsTOF filters + parameters</string>
+           </property>
+          </widget>
+         </item>
+         <item row="19" column="1">
+          <widget class="QLineEdit" name="ttfparam_edit"/>
+         </item>
+         <item row="19" column="2">
+          <widget class="QToolButton" name="ttfparam_button">
+           <property name="text">
+            <string>...</string>
+           </property>
+           <property name="icon">
+            <iconset resource="../../../xtpcpp.qrc">
+             <normaloff>:/icons/resources/icons/icon_info.svg</normaloff>:/icons/resources/icons/icon_info.svg</iconset>
+           </property>
+           <property name="iconSize">
+            <size>
+             <width>20</width>
+             <height>20</height>
+            </size>
+           </property>
+           <property name="autoRaise">
+            <bool>true</bool>
+           </property>
+          </widget>
+         </item>
         </layout>
        </item>
       </layout>
@@ -984,8 +1014,8 @@
        <rect>
         <x>0</x>
         <y>0</y>
-        <width>797</width>
-        <height>524</height>
+        <width>408</width>
+        <height>344</height>
        </rect>
       </property>
       <attribute name="label">
@@ -1493,8 +1523,8 @@
        <rect>
         <x>0</x>
         <y>0</y>
-        <width>797</width>
-        <height>524</height>
+        <width>279</width>
+        <height>185</height>
        </rect>
       </property>
       <attribute name="label">
@@ -1770,8 +1800,8 @@
        <rect>
         <x>0</x>
         <y>0</y>
-        <width>797</width>
-        <height>524</height>
+        <width>398</width>
+        <height>350</height>
        </rect>
       </property>
       <attribute name="label">
@@ -2291,8 +2321,8 @@
       <property name="geometry">
        <rect>
         <x>0</x>
-        <y>-84</y>
-        <width>783</width>
+        <y>0</y>
+        <width>414</width>
         <height>608</height>
        </rect>
       </property>
@@ -3193,8 +3223,8 @@
        <rect>
         <x>0</x>
         <y>0</y>
-        <width>797</width>
-        <height>524</height>
+        <width>362</width>
+        <height>449</height>
        </rect>
       </property>
       <attribute name="label">
@@ -5218,6 +5248,22 @@
     </hint>
    </hints>
   </connection>
+  <connection>
+   <sender>ttfparam_button</sender>
+   <signal>clicked()</signal>
+   <receiver>XtandemParamWidget</receiver>
+   <slot>doHelp()</slot>
+   <hints>
+    <hint type="sourcelabel">
+     <x>767</x>
+     <y>550</y>
+    </hint>
+    <hint type="destinationlabel">
+     <x>585</x>
+     <y>369</y>
+    </hint>
+   </hints>
+  </connection>
  </connections>
  <slots>
   <slot>doHelp()</slot>
diff --git a/src/gui/widgets/engines_view/xtandemparamwidget.cpp b/src/gui/widgets/engines_view/xtandemparamwidget.cpp
index aa9e4ac9b95e756ce60e9f2211315f808baf3595..8cc7dd899f34038c743beb03029542de896f2855 100644
--- a/src/gui/widgets/engines_view/xtandemparamwidget.cpp
+++ b/src/gui/widgets/engines_view/xtandemparamwidget.cpp
@@ -344,7 +344,10 @@ XtandemParamWidget::doHelp()
     {
       html_doc.setFileName(":/tandem/resources/html_doc/oxp.html");
     }
-
+  if(senderObjName == "ttfparam_button")
+    {
+      html_doc.setFileName(":/tandem/resources/html_doc/ttfparam.html");
+    }
   if(html_doc.open(QFile::ReadOnly | QFile::Text))
     {
       QTextStream in(&html_doc);
@@ -378,8 +381,7 @@ XtandemParamWidget::setSpectrumParameters(TandemParameters xtandem_parameters)
   ui->useChemicalAverageOrMonoisotopicMassForFragmentIonsLineEdit->setText(
     xtandem_parameters.getValue("spectrum, fragment mass type"));
   ui->unitsForFragmentIonMassToleranceMonoisotopicLineEdit->setText(
-    xtandem_parameters.getValue(
-      "spectrum, fragment monoisotopic mass error"));
+    xtandem_parameters.getValue("spectrum, fragment monoisotopic mass error"));
   ui->fragmentIonMassToleranceMonoisotopicLineEdit->setText(
     xtandem_parameters.getValue(
       "spectrum, parent monoisotopic mass error minus"));
@@ -405,6 +407,8 @@ XtandemParamWidget::setSpectrumParameters(TandemParameters xtandem_parameters)
     xtandem_parameters.getValue("spectrum, use contrast angle"));
   ui->setNumberOfThreadsLineEdit->setText(
     xtandem_parameters.getValue("spectrum, threads"));
+  ui->ttfparam_edit->setText(
+    xtandem_parameters.getValue("spectrum, timstof MS2 filters"));
 }
 
 void
diff --git a/src/resources/html_doc/ttcp.html b/src/resources/html_doc/ttfparam.html
similarity index 70%
rename from src/resources/html_doc/ttcp.html
rename to src/resources/html_doc/ttfparam.html
index 773519edad09eaa641feed7eb458b7f0e911ab13..5292c7c39f624c2392480f80fc8ddae583ab6892 100644
--- a/src/resources/html_doc/ttcp.html
+++ b/src/resources/html_doc/ttfparam.html
@@ -102,50 +102,32 @@ td {
 <table>
 <tr>
 <td align="left" valign="top">
-<h1>Centroid Parameters</h1>
-<h2>Instrument resolution</h2>
-<h3>Syntax</h3>
-<p>The value.</p>
-<h3>Notes</h3>
+<h1>TimsTOF Parameters</h1>
+
+<h2>Syntax :</h2>
+<code>filterName1|param1;param2 filterName2|param1;param2</code>
+<h2>Impleted filters</h2>
+<h3>Deconvolution filter</h3>
+<h4>filter name :</h4>
+<p>chargeDeconvolution</p>
+<h4>Parameters</h4>
 <ol>
-<li>TODO</li>
-<li>TODO</li>
+<li>The precision: composed of two parts the numeric value and the unit</li>
 </ol>
-<h3>Description</h3>
-<p>TODO</p>
+<h4>Example</h4>
+<code>chargeDeconvolution|0.02dalton</code>
 
-<h2>Smooth width</h2>
-<h3>Syntax</h3>
-<p>The value.</p>
-<h3>Notes</h3>
+<h3>Ion enhancer filter</h3>
+<h4>filter name :</h4>
+<p>complementIonEnhancer</p>
+<h4>Parameters</h4>
 <ol>
-<li>TODO</li>
-<li>TODO</li>
+<li>The targeted mass of the peak pair</li>
+<li>The precision: composed of two parts the numeric value and the unit</li>
 </ol>
-<h3>Description</h3>
-<p>TODO</p>
+<h4>Example</h4>
+<code>complementIonEnhancer|456.567;0.02dalton</code>
 
-<h2>Integration resolution</h2>
-<h3>Syntax</h3>
-<p>The value.</p>
-<h3>Notes</h3>
-<ol>
-<li>TODO</li>
-<li>TODO</li>
-</ol>
-<h3>Description</h3>
-<p>TODO</p>
-
-<h2>Intensity threshold</h2>
-<h3>Syntax</h3>
-<p>The value.</p>
-<h3>Notes</h3>
-<ol>
-<li>TODO</li>
-<li>TODO</li>
-</ol>
-<h3>Description</h3>
-<p>TODO</p>
 </td></tr></table>
 </body>
 </html>
diff --git a/src/xtpcpp.qrc b/src/xtpcpp.qrc
index 0abcb32ee214798ce1dc508ee031e41560250e20..2c04b3551d096f04a4db6a45974f26854c087ff3 100644
--- a/src/xtpcpp.qrc
+++ b/src/xtpcpp.qrc
@@ -86,7 +86,7 @@
         <file>resources/html_doc/sxi.html</file>
         <file>resources/html_doc/syi.html</file>
         <file>resources/html_doc/szi.html</file>
-        <file>resources/html_doc/ttcp.html</file>
+        <file>resources/html_doc/ttfparam.html</file>
         <file>resources/html_doc/uml_index.html</file>
         <file>resources/model/QExactive_analysis_FDR_nosemi.xml</file>
     </qresource>