From 36b9f6e766f9cd41e548f3a2fe34e782a08cdb8d Mon Sep 17 00:00:00 2001
From: Olivier Langella <Olivier.Langella@moulon.inra.fr>
Date: Fri, 31 Mar 2017 22:26:55 +0200
Subject: [PATCH] yes it works !
---
src/CMakeLists.txt | 4 +-
src/core/project.cpp | 4 +-
src/gui/project_view/projectwindow.cpp | 11 +-
.../protein_list_view/proteinlistwindow.cpp | 52 +++---
src/gui/protein_list_view/proteinlistwindow.h | 4 +-
.../protein_list_view/proteintablemodel.cpp | 170 +++++++++---------
src/gui/protein_list_view/proteintablemodel.h | 23 ++-
src/gui/protein_view/proteinwindow.cpp | 3 +-
8 files changed, 136 insertions(+), 135 deletions(-)
diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt
index 46172223..617e2004 100644
--- a/src/CMakeLists.txt
+++ b/src/CMakeLists.txt
@@ -29,8 +29,8 @@ SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${Qt5Xml_EXECUTABLE_COMPILE_FLAGS} ${Qt5
#sudo apt-get install libpappsomspp-dev
#FIND_PACKAGE( Pappsomspp REQUIRED )
-# SET (PAPPSOMSPP_DIR "/home/olivier/eclipse/git/pappsomspp")
- SET (PAPPSOMSPP_DIR "/home/langella/developpement/git/pappsomspp")
+ SET (PAPPSOMSPP_DIR "/home/olivier/eclipse/git/pappsomspp")
+# SET (PAPPSOMSPP_DIR "/home/langella/developpement/git/pappsomspp")
SET (PAPPSOMSPP_INCLUDE_DIR "${PAPPSOMSPP_DIR}/src")
SET (PAPPSOMSPP_QT4_LIBRARY "${PAPPSOMSPP_DIR}/cbuild/src/libpappsomspp-qt4.so")
diff --git a/src/core/project.cpp b/src/core/project.cpp
index ecbb6f91..7c09d5e3 100644
--- a/src/core/project.cpp
+++ b/src/core/project.cpp
@@ -66,7 +66,7 @@ IdentificationGroup* Project::newIdentificationGroup() {
return _p_current_identification_group;
}
void Project::readXpipFile(QFileInfo xpip_fileinfo) {
-
+ qDebug() << "Project::readXpipFile begin";
XpipSaxHandler * parser = new XpipSaxHandler(this);
@@ -96,6 +96,8 @@ void Project::readXpipFile(QFileInfo xpip_fileinfo) {
}
IdentificationGroup* Project::getCurrentIdentificationGroupP() const {
+
+ qDebug() << "Project::getCurrentIdentificationGroupP begin " << _p_current_identification_group;
return _p_current_identification_group;
}
diff --git a/src/gui/project_view/projectwindow.cpp b/src/gui/project_view/projectwindow.cpp
index 37cc24fd..8774ead8 100644
--- a/src/gui/project_view/projectwindow.cpp
+++ b/src/gui/project_view/projectwindow.cpp
@@ -196,10 +196,10 @@ void ProjectWindow::doViewProteinDetail(ProteinMatch * protein_match) {
}
void ProjectWindow::doViewProteinList(IdentificationGroup* p_identification_group) {
- qDebug() << "ProjectWindow::doViewProteinList begin";
- if (p_identification_group == nullptr) {
+ qDebug() << "ProjectWindow::doViewProteinList begin " << p_identification_group;
+ //if (p_identification_group == nullptr) {
p_identification_group = _project_sp.get()->getCurrentIdentificationGroupP();
- }
+ //}
if (_protein_list_window_collection.size() == 0) {
connectNewProteinListWindow();
}
@@ -209,9 +209,12 @@ void ProjectWindow::doViewProteinList(IdentificationGroup* p_identification_grou
}
- _p_current_protein_list_window->setIdentificationGroup(p_identification_group);
_p_current_protein_list_window->show();
+ qDebug() << "ProjectWindow::doViewProteinList end " << p_identification_group;
+ _p_current_protein_list_window->setIdentificationGroup(p_identification_group);
+
+ emit identificationGroupGrouped(p_identification_group);
qDebug() << "ProjectWindow::doViewProteinList end";
}
diff --git a/src/gui/protein_list_view/proteinlistwindow.cpp b/src/gui/protein_list_view/proteinlistwindow.cpp
index f1f3533a..17b642ed 100644
--- a/src/gui/protein_list_view/proteinlistwindow.cpp
+++ b/src/gui/protein_list_view/proteinlistwindow.cpp
@@ -40,9 +40,9 @@ ProteinListWindow::ProteinListWindow(ProjectWindow *parent):
_p_proxy_model = new ProteinTableProxyModel(this, _protein_table_model_p);
- //_p_proxy_model->setSourceModel(_protein_table_model_p);
- //_p_proxy_model->setDynamicSortFilter(true);
- ui->tableView->setModel( _protein_table_model_p );
+ _p_proxy_model->setSourceModel(_protein_table_model_p);
+ _p_proxy_model->setDynamicSortFilter(true);
+ ui->tableView->setModel( _p_proxy_model );
ui->tableView->setSortingEnabled(true);
QSettings settings;
@@ -50,17 +50,17 @@ ProteinListWindow::ProteinListWindow(ProjectWindow *parent):
if (hide) {
ui->hideNotValidCheckBox->setCheckState(Qt::Checked);
}
- _protein_table_model_p->hideNotValid(hide);
+ _p_proxy_model->hideNotValid(hide);
hide = settings.value("proteinview/hidenotchecked", "false").toBool();
if (hide) {
ui->hideNotCheckedCheckBox->setCheckState(Qt::Checked);
}
- _protein_table_model_p->hideNotChecked(hide);
+ _p_proxy_model->hideNotChecked(hide);
hide = settings.value("proteinview/hidenotgrouped", "false").toBool();
if (hide) {
ui->hideNotGroupedCheckBox->setCheckState(Qt::Checked);
}
- _protein_table_model_p->hideNotGrouped(settings.value("proteinview/hidenotgrouped", "false").toBool());
+ _p_proxy_model->hideNotGrouped(settings.value("proteinview/hidenotgrouped", "false").toBool());
#if QT_VERSION >= 0x050000
@@ -72,9 +72,10 @@ ProteinListWindow::ProteinListWindow(ProjectWindow *parent):
*/
#else
// Qt4 code
+ connect (this, SIGNAL(proteinDataChanged()), _protein_table_model_p, SLOT(onProteinDataChanged()));
connect(ui->tableView, SIGNAL(clicked(const QModelIndex &)), _p_proxy_model, SLOT(onTableClicked(const QModelIndex &)));
//connect(ui->tableView, SIGNAL(doubleClicked(const QModelIndex &)), _p_proxy_model, SLOT(onTableDoubleClicked(const QModelIndex &)));
- connect(ui->proteinSearchEdit, SIGNAL(textChanged(QString)), _protein_table_model_p, SLOT(onProteinSearchEdit(QString)));
+ connect(ui->proteinSearchEdit, SIGNAL(textChanged(QString)), _p_proxy_model, SLOT(onProteinSearchEdit(QString)));
//connect( this, SIGNAL( focusReceived(bool) ),this, SLOT(doFocusReceived(bool)) );
@@ -82,7 +83,7 @@ ProteinListWindow::ProteinListWindow(ProjectWindow *parent):
this, SLOT(showContextMenu(const QPoint &)));
//connect(_p_proxy_model, SIGNAL(layoutChanged()),
// this, SLOT(doProxyLayoutChanged()));
- //connect(_protein_table_model_p, SIGNAL(layoutChanged()), this, SLOT(updateStatusBar()));
+ connect(_protein_table_model_p, SIGNAL(layoutChanged()), this, SLOT(updateStatusBar()));
#endif
}
@@ -160,54 +161,57 @@ void ProteinListWindow::edited() {
}
void ProteinListWindow::doNotValidHide(bool hide) {
qDebug() << "ProteinListWindow::doNotValidHide begin";
- _protein_table_model_p->hideNotValid(hide);
+ _p_proxy_model->hideNotValid(hide);
QSettings settings;
settings.setValue("proteinview/hidenotvalid", QString("%1").arg(hide));
+ emit proteinDataChanged();
qDebug() << "ProteinListWindow::doNotValidHide end";
}
void ProteinListWindow::doNotCheckedHide(bool hide) {
qDebug() << "ProteinListWindow::doNotCheckedHide begin";
- _protein_table_model_p->hideNotChecked(hide);
+ _p_proxy_model->hideNotChecked(hide);
QSettings settings;
settings.setValue("proteinview/hidenotchecked", QString("%1").arg(hide));
+ emit proteinDataChanged();
qDebug() << "ProteinListWindow::doNotCheckedHide end";
}
void ProteinListWindow::doNotGroupedHide(bool hide) {
qDebug() << "ProteinListWindow::doNotGroupedHide begin";
- _protein_table_model_p->hideNotGrouped(hide);
+ _p_proxy_model->hideNotGrouped(hide);
QSettings settings;
settings.setValue("proteinview/hidenotgrouped", QString("%1").arg(hide));
+ emit proteinDataChanged();
qDebug() << "ProteinListWindow::doNotGroupedHide end";
}
void ProteinListWindow::doIdentificationGroupGrouped(IdentificationGroup * p_identification_group) {
qDebug() << "ProteinListWindow::doIdentificationGroupGrouped begin";
if (_p_identification_group == p_identification_group) {
+ //_protein_table_model_p->setIdentificationGroup(p_identification_group);
//_p_proxy_model->setSourceModel(_protein_table_model_p);
+ emit proteinDataChanged();
}
+
qDebug() << "ProteinListWindow::doIdentificationGroupGrouped end";
}
void ProteinListWindow::setIdentificationGroup(IdentificationGroup * p_identification_group) {
- qDebug() << "ProteinListWindow::setIdentificationGroup begin";
- if (_p_identification_group != p_identification_group) {
+ qDebug() << "ProteinListWindow::setIdentificationGroup begin " ;
+ if (p_identification_group != nullptr) {
+ qDebug() << "ProteinListWindow::setIdentificationGroup not null";
_p_identification_group = p_identification_group;
_protein_table_model_p->setIdentificationGroup(p_identification_group);
- _p_proxy_model->setSourceModel(_protein_table_model_p);
+ //_p_proxy_model->setSourceModel(_protein_table_model_p);
+
+
+ }
+ else {
+ qDebug() << "ProteinListWindow::setIdentificationGroup null";
}
- qDebug() << "ProteinListWindow::setIdentificationGroup end";
-}
-
-
-void ProteinListWindow::refresh() {
- if (_p_identification_group == nullptr) return;
- qDebug() << "ProteinListWindow::refresh begin " << _p_identification_group->getProteinMatchList().size();
- //_p_proxy_model->setSourceModel(_protein_table_model_p);
- qDebug() << "ProteinListWindow::refresh end ";
+ qDebug() << "ProteinListWindow::setIdentificationGroup end";
}
-
void ProteinListWindow::updateStatusBar() {
if (_p_identification_group == nullptr) {
}
diff --git a/src/gui/protein_list_view/proteinlistwindow.h b/src/gui/protein_list_view/proteinlistwindow.h
index b0840f4c..3c070ee0 100644
--- a/src/gui/protein_list_view/proteinlistwindow.h
+++ b/src/gui/protein_list_view/proteinlistwindow.h
@@ -56,6 +56,7 @@ public slots:
// void setShape(Shape shape);
signals:
void identificationGroupEdited(IdentificationGroup * p_identification_group);
+ void proteinDataChanged();
protected slots:
@@ -66,9 +67,8 @@ protected slots:
void showContextMenu(const QPoint &);
void showEvalueColumn(bool show);
void showAccessionColumn(bool show);
-protected :
- void refresh();
void updateStatusBar();
+protected :
void askProteinDetailView(ProteinMatch * p_protein_match);
void askPeptideListView(ProteinMatch * p_protein_match);
diff --git a/src/gui/protein_list_view/proteintablemodel.cpp b/src/gui/protein_list_view/proteintablemodel.cpp
index eb0d5dfc..b71d4cc8 100644
--- a/src/gui/protein_list_view/proteintablemodel.cpp
+++ b/src/gui/protein_list_view/proteintablemodel.cpp
@@ -38,7 +38,57 @@ ProteinTableProxyModel::ProteinTableProxyModel(ProteinListWindow * p_protein_lis
}
bool ProteinTableProxyModel::filterAcceptsRow(int source_row,
const QModelIndex &source_parent) const {
- return _protein_table_model_p->acceptRow(source_row);
+ try {
+ qDebug() << "ProteinTableProxyModel::filterAcceptsRow begin " << source_row;
+ ProteinMatch * protein_match = _protein_table_model_p->getIdentificationGroup()->getProteinMatchList().at(source_row);
+ qDebug() << "ProteinTableProxyModel::filterAcceptsRow protein_match " << source_row;
+ /*
+ if (!_protein_search_string.isEmpty()) {
+ if (!protein_match->getProteinXtpSp().get()->getDescription().contains(_protein_search_string)) {
+ return false;
+ }
+ }
+ */
+ qDebug() << "ProteinTableProxyModel::filterAcceptsRow valid ";
+ if (_hide_not_valid) {
+ if (! protein_match->isValid()) {
+ return false;
+ }
+ }
+ qDebug() << "ProteinTableProxyModel::filterAcceptsRow checked ";
+ if (_hide_not_checked) {
+ if (! protein_match->isChecked()) {
+ return false;
+ }
+ }
+
+ qDebug() << "ProteinTableProxyModel::filterAcceptsRow grouped ";
+ pappso::GrpProtein * p_grp_prot = protein_match->getGrpProteinSp().get();
+ if (_hide_not_grouped) {
+ if (p_grp_prot == nullptr) {
+ return false;
+ }
+
+ qDebug() << "ProteinTableProxyModel::filterAcceptsRow grouped 2";
+ if (p_grp_prot->getGroupingId().isEmpty()) {
+ return false;
+ }
+ }
+ }
+
+ catch (pappso::PappsoException exception_pappso) {
+ //QMessageBox::warning(this,
+ // tr("Error in ProteinTableModel::acceptRow :"), exception_pappso.qwhat());
+ qDebug() << "Error in ProteinTableModel::acceptRow :" << exception_pappso.qwhat();
+ }
+ catch (std::exception exception_std) {
+ //QMessageBox::warning(this,
+ // tr("Error in ProteinTableModel::acceptRow :"), exception_std.what());
+ qDebug() << "Error in ProteinTableModel::acceptRow :" << exception_std.what();
+ }
+
+ return true;
+
//return true;
}
@@ -114,57 +164,35 @@ QVariant ProteinTableProxyModel::headerData(int section, Qt::Orientation orienta
role);
}
-IdentificationGroup * ProteinTableModel::getIdentificationGroup() {
- return _p_identification_group;
-}
-ProteinTableModel::ProteinTableModel(ProteinListWindow * p_protein_list_window)
- :QAbstractTableModel(p_protein_list_window)
-{
- _p_protein_list_window = p_protein_list_window;
- _p_identification_group = nullptr;
- //ui->tableView->show();
- // QModelIndex topLeft = createIndex(0,0);
- //emit a signal to make the view reread identified data
- //emit dataChanged(topLeft, topLeft);
-}
-
-void ProteinTableModel::refresh() {
- if (_p_identification_group == nullptr) return;
- qDebug() << "ProteinTableModel::refresh begin " << _p_identification_group->getProteinMatchList().size();
- _p_protein_list_window->refresh();
- //emit layoutAboutToBeChanged();
- QModelIndex topLeft = createIndex(0,0);
- QModelIndex bottomRight = createIndex(rowCount(),columnCount());
- qDebug() << "ProteinTableModel::refresh emit dataChanged ";
- emit dataChanged(topLeft, bottomRight);
- //emit layoutChanged();
- qDebug() << "ProteinTableModel::refresh end ";
-}
-
-void ProteinTableModel::hideNotValid(bool hide) {
+void ProteinTableProxyModel::hideNotValid(bool hide) {
_hide_not_valid = hide;
- refresh();
}
-void ProteinTableModel::hideNotChecked(bool hide) {
- qDebug() << "ProteinTableModel::hideNotChecked begin ";
+void ProteinTableProxyModel::hideNotChecked(bool hide) {
+ qDebug() << "ProteinTableProxyModel::hideNotChecked begin ";
_hide_not_checked = hide;
- refresh();
- qDebug() << "ProteinTableModel::hideNotChecked end ";
+ qDebug() << "ProteinTableProxyModel::hideNotChecked end ";
}
-void ProteinTableModel::hideNotGrouped(bool hide) {
+void ProteinTableProxyModel::hideNotGrouped(bool hide) {
_hide_not_grouped = hide;
- refresh();
}
-void ProteinTableModel::onProteinSearchEdit(QString protein_search_string) {
- qDebug() << "ProteinTableModel::onProteinSearchEdit begin " << protein_search_string;
+void ProteinTableProxyModel::onProteinSearchEdit(QString protein_search_string) {
+ qDebug() << "ProteinTableProxyModel::onProteinSearchEdit begin " << protein_search_string;
_protein_search_string = protein_search_string;
- QModelIndex topLeft = createIndex(0,0);
- QModelIndex bottomRight = createIndex(rowCount(),columnCount());
- emit dataChanged(topLeft, bottomRight);
//emit layoutChanged();
}
+
+IdentificationGroup * ProteinTableModel::getIdentificationGroup() {
+ return _p_identification_group;
+}
+ProteinTableModel::ProteinTableModel(ProteinListWindow * p_protein_list_window)
+ :QAbstractTableModel(p_protein_list_window)
+{
+ _p_protein_list_window = p_protein_list_window;
+ _p_identification_group = nullptr;
+}
+
void ProteinTableModel::setIdentificationGroup(IdentificationGroup * p_identification_group) {
qDebug() << "ProteinTableModel::setIdentificationGroup begin " << p_identification_group->getProteinMatchList().size();
beginResetModel();
@@ -172,20 +200,21 @@ void ProteinTableModel::setIdentificationGroup(IdentificationGroup * p_identific
//emit headerDataChanged(Qt::Horizontal, 0,11);
//refresh();
- endResetModel();
qDebug() << "ProteinTableModel::setIdentificationGroup end ";
+ endResetModel();
}
+
int ProteinTableModel::rowCount(const QModelIndex &parent ) const {
- qDebug() << "ProteinTableModel::rowCount begin ";
+ qDebug() << "ProteinTableModel::rowCount begin ";
if (_p_identification_group != nullptr) {
- //qDebug() << "ProteinTableModel::rowCount(const QModelIndex &parent ) " << _p_identification_group->getProteinMatchList().size();
- return _p_identification_group->getProteinMatchList().size();
+ qDebug() << "ProteinTableModel::rowCount(const QModelIndex &parent ) " << _p_identification_group->getProteinMatchList().size();
+ return (int) _p_identification_group->getProteinMatchList().size();
}
return 0;
}
int ProteinTableModel::columnCount(const QModelIndex &parent ) const {
- qDebug() << "ProteinTableModel::columnCount begin ";
+ qDebug() << "ProteinTableModel::columnCount begin ";
if (_p_identification_group != nullptr) {
return 11;
}
@@ -193,6 +222,7 @@ int ProteinTableModel::columnCount(const QModelIndex &parent ) const {
}
QVariant ProteinTableModel::headerData(int section, Qt::Orientation orientation, int role) const
{
+ if (_p_identification_group == nullptr) return QVariant();
if (role == Qt::DisplayRole)
{
if (orientation == Qt::Horizontal) {
@@ -227,12 +257,12 @@ QVariant ProteinTableModel::headerData(int section, Qt::Orientation orientation,
}
QVariant ProteinTableModel::data(const QModelIndex &index, int role ) const {
// generate a log message when this method gets called
+ if (_p_identification_group == nullptr) return QVariant();
int row = index.row();
int col = index.column();
// qDebug() << QString("row %1, col%2, role %3")
// .arg(row).arg(col).arg(role);
-
switch(role) {
case Qt::CheckStateRole:
@@ -317,46 +347,8 @@ QVariant ProteinTableModel::data(const QModelIndex &index, int role ) const {
return QVariant();
}
-bool ProteinTableModel::acceptRow(int source_row) {
- try {
- ProteinMatch * protein_match = _p_identification_group->getProteinMatchList().at(source_row);
-
- if (!_protein_search_string.isEmpty()) {
- if (!protein_match->getProteinXtpSp().get()->getDescription().contains(_protein_search_string)) {
- return false;
- }
- }
-
- if (_hide_not_valid) {
- if (! protein_match->isValid()) {
- return false;
- }
- }
- if (_hide_not_checked) {
- if (! protein_match->isChecked()) {
- return false;
- }
- }
- pappso::GrpProtein * p_grp_prot = protein_match->getGrpProteinSp().get();
- if (_hide_not_grouped) {
- if (p_grp_prot == nullptr)
- return false;
- }
- if (p_grp_prot->getGroupingId().isEmpty()) {
- return false;
- }
- }
-
- catch (pappso::PappsoException exception_pappso) {
- //QMessageBox::warning(this,
- // tr("Error in ProteinTableModel::acceptRow :"), exception_pappso.qwhat());
- qDebug() << "Error in ProteinTableModel::acceptRow :" << exception_pappso.qwhat();
- }
- catch (std::exception exception_std) {
- //QMessageBox::warning(this,
- // tr("Error in ProteinTableModel::acceptRow :"), exception_std.what());
- qDebug() << "Error in ProteinTableModel::acceptRow :" << exception_std.what();
- }
-
- return true;
+void ProteinTableModel::onProteinDataChanged() {
+ qDebug() << "ProteinTableModel::onProteinDataChanged begin " << rowCount();
+ emit layoutAboutToBeChanged();
+ emit layoutChanged();
}
diff --git a/src/gui/protein_list_view/proteintablemodel.h b/src/gui/protein_list_view/proteintablemodel.h
index 47c38557..829a3dfe 100644
--- a/src/gui/protein_list_view/proteintablemodel.h
+++ b/src/gui/protein_list_view/proteintablemodel.h
@@ -42,12 +42,22 @@ public:
QVariant headerData(int section, Qt::Orientation orientation,
int role) const override;
bool lessThan(const QModelIndex & left, const QModelIndex & right) const override;
+
+ void hideNotValid(bool hide);
+ void hideNotChecked(bool hide);
+ void hideNotGrouped(bool hide);
public slots:
void onTableClicked(const QModelIndex &index);
+ void onProteinSearchEdit(QString protein_search_string);
+
private:
ProteinTableModel* _protein_table_model_p;
ProteinListWindow * _p_protein_list_window;
+ QString _protein_search_string;
+ bool _hide_not_valid = true;
+ bool _hide_not_checked = true;
+ bool _hide_not_grouped = true;
};
class ProteinTableModel: public QAbstractTableModel
@@ -63,24 +73,13 @@ public:
void setIdentificationGroup(IdentificationGroup * p_identification_group);
IdentificationGroup * getIdentificationGroup();
- bool acceptRow(int source_row);
-
- void hideNotValid(bool hide);
- void hideNotChecked(bool hide);
- void hideNotGrouped(bool hide);
-
public slots:
- void onProteinSearchEdit(QString protein_search_string);
-
+ void onProteinDataChanged();
private :
void refresh();
private :
IdentificationGroup * _p_identification_group = nullptr;
ProteinListWindow * _p_protein_list_window;
- QString _protein_search_string;
- bool _hide_not_valid = true;
- bool _hide_not_checked = true;
- bool _hide_not_grouped = true;
};
#endif // PROTEINTABLEMODEL_H
diff --git a/src/gui/protein_view/proteinwindow.cpp b/src/gui/protein_view/proteinwindow.cpp
index cd01270a..9fea5f2e 100644
--- a/src/gui/protein_view/proteinwindow.cpp
+++ b/src/gui/protein_view/proteinwindow.cpp
@@ -26,6 +26,7 @@
#include "ui_protein_detail_view.h"
#include <pappsomspp/pappsoexception.h>
#include <QMessageBox>
+#include <cmath>
ProteinWindow::ProteinWindow(ProjectWindow *parent):
QMainWindow(parent),
@@ -62,7 +63,7 @@ void ProteinWindow::setProteinMatch(ProteinMatch * p_protein_match) {
ui->coverage_label->setText(QString("%1 %").arg(p_protein_match->getCoverage()*100));
pappso::Peptide peptide(p_protein_match->getProteinXtpSp().get()->getSequence());
ui->mw_label->setText(QString("%1 kDa").arg(peptide.getMass()/1000));
- ui->evalue_label->setText(QString("%1 (log10: %2)").arg(p_protein_match->getEvalue()).arg(log10(p_protein_match->getEvalue())));
+ ui->evalue_label->setText(QString("%1 (log10: %2)").arg(p_protein_match->getEvalue()).arg(std::log10(p_protein_match->getEvalue())));
}
catch (pappso::PappsoException exception_pappso) {
QMessageBox::warning(this,
--
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