Commit 1971b213 authored by Langella Olivier's avatar Langella Olivier
Browse files

Merge branch 'renne' into 'master'

correct condor submit argument

See merge request !37
parents ca60f826 bec8c5e2
......@@ -167,7 +167,7 @@ MassChroQCondorProcess::createCondorSubmitFile()
*p_out << "Executable = " << m_masschroqRunBatch.masschroq_bin_path
<< endl;
*p_out << "Arguments = "
<< "-c " << m_masschroqRunBatch.number_cpu << " -t "
<< "--cpus " << m_masschroqRunBatch.number_cpu << " -t "
<< m_masschroqRunBatch.masschroq_temporary_dir_path;
if(m_masschroqRunBatch.on_disk)
{
......@@ -175,9 +175,9 @@ MassChroQCondorProcess::createCondorSubmitFile()
}
if(m_masschroqRunBatch.parse_peptide)
{
*p_out << " --parse-peptides ";
*p_out << " --parse-peptides";
}
*p_out << m_masschroqRunBatch.masschroqml_path << endl;
*p_out << " " << m_masschroqRunBatch.masschroqml_path << endl;
*p_out << "Queue" << endl;
}
else
......
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