msidentificationlistwindow.cpp

/*******************************************************************************
 * Copyright (c) 2019 Olivier Langella <Olivier.Langella@moulon.inra.fr>.
 *
 * This file is part of XTPcpp.
 *
 *     XTPcpp is free software: you can redistribute it and/or modify
 *     it under the terms of the GNU General Public License as published by
 *     the Free Software Foundation, either version 3 of the License, or
 *     (at your option) any later version.
 *
 *     XTPcpp is distributed in the hope that it will be useful,
 *     but WITHOUT ANY WARRANTY; without even the implied warranty of
 *     MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 *     GNU General Public License for more details.
 *
 *     You should have received a copy of the GNU General Public License
 *     along with XTPcpp.  If not, see <http://www.gnu.org/licenses/>.
 *
 * Contributors:
 *    Thomas Renne <thomas.renne@u-psud.fr>. - initial API and
 *implementation
 ******************************************************************************/

#include "ui_ms_identification_run_view.h"
#include "msidentificationlistwindow.h"

#include "../../mainwindow.h"
#include <QSettings>
#include <odsstream/odsdocwriter.h>
#include <odsstream/qtablewriter.h>

MsIdentificationListWindow::MsIdentificationListWindow(ProjectWindow *parent)
  : QMainWindow(parent), ui(new Ui::MsIdentificationView)
{
  m_project_window = parent;
  ui->setupUi(this);
  setWindowIcon(QIcon(":/xtpcpp_icon/resources/xtandempipeline_icon.svg"));

  m_msid_table_model_p = new MsIdentificationTableModel(this);


  m_proxy_model =
    new MsIdentificationTableProxyModel(this, m_msid_table_model_p);
  m_proxy_model->setSourceModel(m_msid_table_model_p);
  m_proxy_model->setDynamicSortFilter(true);

  ui->tableView->setModel(m_proxy_model);
  ui->tableView->setSortingEnabled(true);
  ui->tableView->setAlternatingRowColors(true);

  m_proxy_model->resteItemDelegates();

  connect(this,
          &MsIdentificationListWindow::MsIdentificationDataChanged,
          m_msid_table_model_p,
          &MsIdentificationTableModel::onMsIdentificationDataChanged);
  connect(m_msid_table_model_p,
          &MsIdentificationTableModel::layoutChanged,
          this,
          &MsIdentificationListWindow::updateStatusBar);
  connect(ui->tableView,
          &QTableView::clicked,
          m_proxy_model,
          &MsIdentificationTableProxyModel::onTableClicked);
}

void
MsIdentificationListWindow::resizeColumnsToContents()
{
  ui->tableView->resizeColumnsToContents();
}

void
MsIdentificationListWindow::doSearchOn(QString search_on)
{
  qDebug() << "ProteinTableProxyModel::doSearchOn begin " << search_on;
  m_proxy_model->setSearchOn(search_on);
  emit MsIdentificationDataChanged();
}

void
MsIdentificationListWindow::onMsIdentificationSearchEdit(
  QString ms_id_search_string)
{
  qDebug()
    << "MsIdentificationTableProxyModel::onMsIdentificationSearchEdit begin "
    << ms_id_search_string;
  m_proxy_model->setMsIdentificationSearchString(ms_id_search_string);
  emit MsIdentificationDataChanged();
}

MsIdentificationListWindow::~MsIdentificationListWindow()
{
}

void
MsIdentificationListWindow::updateStatusBar()
{
  ui->statusbar->showMessage(
    tr("Ms identification all:%1 displayed:%5")
      .arg(m_msid_table_model_p->getIdentificationDataSourceSpList().size())
      .arg(m_proxy_model->rowCount()));
}

void
MsIdentificationListWindow::setIdentificationDataSourceSpList(
  std::vector<IdentificationDataSourceSp> &identificationDataSourceSpList)
{
  qDebug() << "MsIdentificationListWindow::setIdentificationGroup begin ";

  m_msid_table_model_p->setIdentificationDataSourceSpList(
    identificationDataSourceSpList);

  qDebug() << "MsIdentificationListWindow::setIdentificationGroup end";
}

void
MsIdentificationListWindow::doExportAsOdsFile()
{
  QSettings settings;
  QString default_location = settings.value("path/export_ods", "").toString();

  QString filename;
  filename = QFileDialog::getSaveFileName(
    this,
    tr("Save ODS file"),
    QString("%1/untitled.ods").arg(default_location),
    tr("Open Document Spreadsheet (*.ods)"));

  if(!filename.isEmpty())
    {
      CalcWriterInterface *p_writer            = new OdsDocWriter(filename);
      const QAbstractProxyModel *p_table_model = m_proxy_model;

      QtableWriter table_writer(p_writer, p_table_model);

      table_writer.setFormatPercentForColumn(m_msid_table_model_p->index(
        0, (int)msIdentificationListColumn::percent_assign));

      table_writer.writeSheet("Ms Identification list");

      p_writer->close();
      delete p_writer;
    }
}