****** MassChroQ version 2.0 "Spectacled Caiman" readme file ******

This file contains instructions to compile and install MassChroQ
version 2.0 "Spectacled Caiman", from sources on Linux systems. 
For other installation options (packages/repository for Linux, 
or Windows installers) please refer to the MassChroQ homepage at
<http://pappso.inra.fr/bioinfo/masschroq>.


1- Requirements

You will need:
cmake (version >= 2.6)
gcc (>=4.1.1)
Qt 4 (exactly libqt4-network, libqt4-xml, libqt4-xmlpatterns,
libqtcore4, libqtgui4 and libqt4-dev,  all of them >=4.5.3).
Qwt (libqwt5-qt4, libqwt5-qt4-dev)

2- Configuration 

In the masschroq directory type:

cmake . 

This will configure masschroq for build on your system and will check
for presence of compiling libraries (gcc, qt). Check error messages,
if any, to see what library is missing. In that case install it and
run the cmake command again.
By default, masschroq will be installed in your /usr/local
directory. If you want to install it in another location, for example
the /usr directory of your system, you should instead type the
following command:

cmake -DCMAKE_INSTALL_PREFIX=/usr .

3- Compilation

In the masschroq directory type:

make

This will compile masschroq (the masschroq shared library and the main binary).

4- Install
In the masschroq directory type:

sudo make install

This installs the masschroq library, binary and manpage in your system
(by default in /usr/local, for another install location see section 1)
above).

In case of problems with the install procedure you can check for
further information on the MassChroQ homepage at
<http://pappso.inra.fr/bioinfo/masschroq>, or write to our mailing
list <pappso-tools@listes.inra.fr> (https://listes.inra.fr/sympa/info/pappso-tools).
You can also contact one of its developers at
<valot@moulon.inra.fr> or 
<olivier.langella@moulon.inra.fr>.