Commit 75d8614d authored by Edlira Nano's avatar Edlira Nano
Browse files

preparing post matching release 2

git-svn-id: e4b6dbb4-9209-464b-83f7-6257456c460c
parent d6326223
<?xml version="1.0" encoding="UTF-8"?>
masschroqML version 1.1 schema (http://pappso/bioinfo/masschroq/).
masschroqML version 1.2 schema (http://pappso/bioinfo/masschroq/), first introduced in
MassChroQ version 1.2.
Retro compatibility with older masschroq schemas and versions is assured.
In this version we have added the peak post_matching feature and the alignment results
for the masschroqML result (output) files.
......@@ -82,7 +83,7 @@
<xs:element ref="rawdata" maxOccurs="1" minOccurs="1"/>
<xs:element ref="groups" maxOccurs="1" minOccurs="0"/>
<xs:element ref="groups" maxOccurs="1" minOccurs="1"/>
<xs:element ref="peptide_files_list" maxOccurs="1" minOccurs="0"/>
<xs:element ref="protein_list" maxOccurs="1" minOccurs="0"/>
<xs:element ref="peptide_list" maxOccurs="1" minOccurs="0"/>
......@@ -526,8 +527,8 @@
<xs:element name="ms2_tendency_halfwindow" type="xs:double"/>
<xs:element name="ms2_smoothing_halfwindow" type="xs:double"/>
<xs:element name="ms1_smoothing_halfwindow" type="xs:double"/>
<xs:element name="ms2_smoothing_halfwindow" type="xs:double" minOccurs="0"/>
<xs:element name="ms1_smoothing_halfwindow" type="xs:double" minOccurs="0"/>
......@@ -812,7 +813,7 @@
list of proteins.
- tsv : (tabulation separated values) as above two files will be
- xml : masschroqXML format. This result file will contain the
- masschroqml : masschroqML xml format. This result file will contain the
input XML file completed with the 'results' xml tag which
contains the quantification data.
......@@ -835,7 +836,7 @@
<xs:enumeration value="gnumeric"></xs:enumeration>
<xs:enumeration value="xhtmltable"></xs:enumeration>
<xs:enumeration value="tsv"></xs:enumeration>
<xs:enumeration value="xml"></xs:enumeration>
<xs:enumeration value="masschroqml"></xs:enumeration>
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