licence file COPYING added, iss file to install masschroq on windows

CMakeLists.txt

@@ -190,6 +190,7 @@ configure_file (${masschroq_SOURCE_DIR}/src/config.h.cmake ${masschroq_SOURCE_DI
 configure_file (${CMAKE_SOURCE_DIR}/doc/scripts/masschroq-condor.pl.cmake ${CMAKE_BINARY_DIR}/src/masschroq-condor.pl @ONLY)
 configure_file (${CMAKE_SOURCE_DIR}/doc/scripts/masschroq-split.py.cmake ${CMAKE_BINARY_DIR}/src/masschroq-split.py)
 
+configure_file (${CMAKE_SOURCE_DIR}/win64/masschroq-mingw64-win7+.iss.cmake ${CMAKE_SOURCE_DIR}/win64/masschroq-mingw64-win7+.iss)
 
 
 SET(CPACK_PACKAGE_EXECUTABLES "masschroq" "masschroq")

README

-****** MassChroQ version 2.1 "Yacare Caiman" readme file ******
 
-This file contains instructions to compile and install MassChroQ
-version 2.0 "Spectacled Caiman", from sources on Linux systems. 
-For other installation options (packages/repository for Linux, 
-or Windows installers) please refer to the MassChroQ homepage at
-<http://pappso.inra.fr/bioinfo/masschroq>.
+MassChroQ Copyright : © 2009-2018, Benoit Valot, Edlira Nano, Olivier Langella
 
+MassChroQ is distributed under the terms of the GNU General Public License (available in the COPYING file)
 
-1- Requirements
+more information on :
+http://pappso.inra.fr/bioinfo/masschroq/
 
-You will need:
-cmake (version >= 2.6)
-gcc (>=4.1.1)
-Qt 4 (exactly libqt4-network, libqt4-xml, libqt4-xmlpatterns,
-libqtcore4, libqtgui4 and libqt4-dev,  all of them >=4.5.3).
-Qwt (libqwt5-qt4, libqwt5-qt4-dev)
-
-2- Configuration 
-
-In the masschroq directory type:
-
-cmake . 
-
-This will configure masschroq for build on your system and will check
-for presence of compiling libraries (gcc, qt). Check error messages,
-if any, to see what library is missing. In that case install it and
-run the cmake command again.
-
-
-3- Compilation
-
-In the masschroq directory type:
-
-make
-
-This will compile masschroq (the masschroq shared library and the main binary).
-
-4- Install
-In the masschroq directory type:
-
-sudo make install
-
-This installs the masschroq library, binary and manpage in your system
-(by default in /usr/local).
+A detailed installation procedure is available for CentOS 7 in the install_centos7.txt.
 
 In case of problems with the install procedure you can check for
 further information on the MassChroQ homepage at
 <http://pappso.inra.fr/bioinfo/masschroq>, or write to our mailing
-list <pappso-tools@listes.inra.fr> (https://listes.inra.fr/sympa/info/pappso-tools).
-You can also contact one of its developers at <olivier.langella@moulon.inra.fr>.
-
-5- Older version
-
-MassChroQ version 2.0 "Spectacled Caiman"
+list <pappso-tools@groupes.renater.fr> (https://groupes.renater.fr/sympa/info/pappso-tools).
+You can also contact one of its developers at <olivier.langella@u-psud.fr>.

win64/masschroq-mingw64-win7+.iss.cmake

+[Setup]
+AppName=MassChroQ
+
+; Set version number below
+#define public version "${MASSCHROQ_VERSION}"
+AppVersion={#version}
+
+#define public arch "mingw64"
+#define public platform "win7+"
+#define sourceDir "C:\msys64\home\polipo\devel\xtandempipeline"
+#define cmake_build_dir "C:\msys64\home\polipo\devel\xtandempipeline\build"
+
+; Set version number below
+AppVerName=MassChroQ version {#version}
+DefaultDirName={pf}\masschroq
+DefaultGroupName=masschroq
+OutputDir="C:\msys64\home\polipo\devel\masschroq\win64"
+
+; Set version number below
+OutputBaseFilename=masschroq-{#arch}-{#platform}-v{#version}-setup
+
+; Set version number below
+OutputManifestFile=masschroq-{#arch}-{#platform}-v{#version}-setup-manifest.txt
+ArchitecturesAllowed=x64
+ArchitecturesInstallIn64BitMode=x64
+
+LicenseFile="{#sourceDir}\COPYING"
+AppCopyright="Copyright (C) 2009-2018 Benoit Valot, Edlira Nano, Olivier Langella"
+
+AllowNoIcons=yes
+AlwaysShowComponentsList=yes
+AllowRootDirectory=no
+AllowCancelDuringInstall=yes
+AppComments="MassChroQ, mass chromatogram quantifier"
+AppContact="Olivier Langella, research engineer at CNRS, France"
+CloseApplications=yes
+CreateUninstallRegKey=yes
+DirExistsWarning=yes
+WindowResizable=yes
+#WizardImageFile="{#sourceDir}\images\splashscreen-innosetup.bmp"
+WizardImageStretch=yes
+
+[Dirs]
+Name: "{app}"
+
+[Files]
+Source: "C:\masschroq-libdeps\*"; DestDir: {app}; Flags: ignoreversion recursesubdirs;
+
+Source: "{#sourceDir}\README"; DestDir: {app}; Flags: isreadme; Components: mcqComp
+Source: "{#sourceDir}\COPYING"; DestDir: {app}; Flags: isreadme; Components: mcqComp
+
+Source: "{#cmake_build_dir}\masschroq.exe"; DestDir: {app}; Components: mcqComp 
+Source: "{#cmake_build_dir}\masschroq_gui.exe"; DestDir: {app}; Components: mcqComp
+Source: "{#cmake_build_dir}\masschroq_studio.exe"; DestDir: {app}; Components: mcqComp
+
+[Icons]
+Name: "{group}\masschroq"; Filename: "{app}\masschroq_gui.exe"; WorkingDir: "{app}"
+Name: "{group}\Uninstall masschroq"; Filename: "{uninstallexe}"
+
+[Types]
+Name: "mcqType"; Description: "Full installation"
+
+[Components]
+Name: "mcqComp"; Description: "MassChroQ files and related documentation"; Types: mcqType
+
+[Run]
+Filename: "{app}\README"; Description: "View the README file"; Flags: postinstall shellexec skipifsilent
+Filename: "{app}\masschroq_gui.exe"; Description: "Launch X!TandemPipeline"; Flags: postinstall nowait unchecked