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PAPPSO
MassChroQ
Commits
62366212
Commit
62366212
authored
Jun 20, 2017
by
Olivier Langella
Browse files
masschroq (2.2.2-5) stretch
parents
3adb5007
3506a8b2
Changes
6
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CMakeLists.txt
View file @
62366212
...
...
@@ -16,7 +16,7 @@ PROJECT(masschroq CXX C)
#depending on libpappsomspp version :
SET
(
LIBPAPPSOMSPP_VERSION
"0.2.3
5
-1"
)
SET
(
LIBPAPPSOMSPP_VERSION
"0.2.3
6
-1"
)
configure_file
(
${
CMAKE_SOURCE_DIR
}
/debian/control.cmake
${
CMAKE_SOURCE_DIR
}
/debian/control @ONLY
)
# Project version
...
...
debian/changelog
View file @
62366212
masschroq (2.2.2-5) stretch; urgency=medium
* new odsstream library
-- Olivier Langella <olivier.langella@u-psud.fr> Tue, 20 Jun 2017 22:23:57 +0200
masschroq (2.2.2-4) jessie; urgency=medium
* new odsstream library
-- Olivier Langella <Olivier.Langella@moulon.inra.fr> Tue, 23 May 2017 22:23:07 +0200
-- Olivier Langella <olivier.langella@u-psud.fr> Tue, 23 May 2017 22:23:07 +0200
masschroq (2.2.2-3~stretch) stretch; urgency=medium
* stretch package
-- Olivier Langella <olivier.langella@u-psud.fr> Thu, 11 May 2017 16:04:52 +0200
masschroq (2.2.2-3) jessie; urgency=medium
...
...
@@ -22,6 +34,18 @@ masschroq (2.2.2-1) jessie; urgency=medium
-- Olivier Langella <Olivier.Langella@moulon.inra.fr> Tue, 18 Apr 2017 13:02:26 +0200
masschroq (2.2.2-1~stretch) stretch; urgency=medium
* stretch package
-- Olivier Langella <olivier.langella@u-psud.fr> Thu, 20 Apr 2017 09:58:04 +0200
masschroq (2.2.1-4~stretch) stretch; urgency=medium
* stretch package
-- Olivier Langella <olivier.langella@u-psud.fr> Sat, 18 Mar 2017 18:05:49 +0100
masschroq (2.2.1-4) jessie; urgency=medium
* new pappso library
...
...
debian/control
deleted
100644 → 0
View file @
3adb5007
Source: masschroq
Section: science
Priority: optional
Maintainer: Olivier Langella <Olivier.Langella@moulon.inra.fr>
Uploaders: Olivier Langella <olivier.langella@moulon.inra.fr>
DM-Upload-Allowed: yes
Standards-Version: 3.9.1.0
Build-Depends: debhelper (>= 5), cmake (>= 2.6), libx11-dev, libc6-dev, libqt4-dev (>= 4.6.3),
libqwt-dev (>=6.0.0), texlive-latex-extra, texlive-latex-recommended, texlive-fonts-recommended,
texlive-science, hevea, inkscape, doxygen, libpappsomspp-dev (= 0.2.35-1), libodsstream-dev (>=0.4.4)
Build-Conflicts: qt3-dev-tools
Homepage: http://pappso.inra.fr/bioinfo/masschroq/
Package: masschroq-common
Architecture: linux-any
Depends: ${shlibs:Depends}, libqtcore4 (>= 4.6.3), libpappsomspp-qt4 (= 0.2.35-1), libodsstream-qt4
Replaces: masschroq (<< 1.5.0)
Conflicts: masschroq (<< 1.5.0)
Suggests: masschroq, masschroq-gui, masschroq-studio
Description: Mass Chromatogram Quantification shared libraries
MassChroQ (Mass Chromatogram Quantification) software performs quantification
of data obtained from LC-MS (Liquid Chromatography - Mass Spectrometry) techniques.
In particular it performs : retention-time alignment of runs, XIC extraction and filtering,
peak detection and quantification.
Package: masschroq-doc
Architecture: all
Depends: ${shlibs:Depends}
Suggests: masschroq, masschroq-gui, masschroq-studio
Description: Mass Chromatogram Quantification documentation
Installs PDF documentation for MassChroQ in /usr/share/doc/masschroq
Package: masschroq
Architecture: any
Depends: ${shlibs:Depends}, masschroq-common (= ${binary:Version}), libqt4-xml (>= 4.6.3)
Suggests: masschroq-doc, masschroq-gui, masschroq-studio
Description: Mass Chromatogram Quantification CLI (Command Line Interface)
MassChroQ (Mass Chromatogram Quantification) software performs quantification
of data obtained from LC-MS (Liquid Chromatography - Mass Spectrometry) techniques.
In particular it performs : retention-time alignment of runs, XIC extraction and filtering,
peak detection and quantification.
Package: masschroq-gui
Architecture: any
Depends: ${shlibs:Depends}, masschroq-common (= ${binary:Version}), libqt4-xml (>= 4.6.3), libqtgui4 (>= 4.6.3), libqt4-xmlpatterns (>= 4.6.3), libqt4-network (>= 4.6.3)
Suggests: masschroq-doc, masschroq-studio
Description: Mass Chromatogram Quantification graphical user interface
MassChroQ (Mass Chromatogram Quantification) software performs quantification
of data obtained from LC-MS (Liquid Chromatography - Mass Spectrometry) techniques.
In particular it performs : retention-time alignment of runs, XIC extraction and filtering,
peak detection and quantification.
Package: masschroq-studio
Architecture: any
Depends: ${shlibs:Depends}, masschroq-common (= ${binary:Version}), libqt4-xml (>= 4.6.3), libqtgui4 (>= 4.6.3),libqwt6 (>= 6.0.0), libqt4-xml (>= 4.6.3)
Suggests: masschroq-doc, masschroq-gui
Description: Mass Chromatogram Quantification graphical user interface to edit parameters
MassChroQ (Mass Chromatogram Quantification) software performs quantification
of data obtained from LC-MS (Liquid Chromatography - Mass Spectrometry) techniques.
In particular it performs : retention-time alignment of runs, XIC extraction and filtering,
peak detection and quantification.
Package: masschroq-condor
Architecture: all
Depends: ${shlibs:Depends}, masschroq, condor
Suggests: masschroq-doc, masschroq-gui, masschroq-studio
Description: Perl script to launch MassChroQ via condor job queue
Perl script to launch MassChroQ via condor job queue
debian/control.cmake
View file @
62366212
Source: masschroq
Section: science
Priority: optional
Maintainer: Olivier Langella <
O
livier.
L
angella@
moulon.inra
.fr>
Uploaders: Olivier Langella <olivier.langella@
moulon.inra
.fr>
Maintainer: Olivier Langella <
o
livier.
l
angella@
u-psud
.fr>
Uploaders: Olivier Langella <olivier.langella@
u-psud
.fr>
DM-Upload-Allowed: yes
Standards-Version: 3.9.1.0
Build-Depends:
debhelper
(
>= 5
)
,
cmake
(
>= 2.6
)
, libx11-dev, libc6-dev, libqt4-
dev
(
>= 4.6.3
)
,
...
...
@@ -62,7 +62,7 @@ Description: Mass Chromatogram Quantification graphical user interface
Package: masschroq-studio
Architecture: any
Depends:
${
shlibs:Depends
}
, masschroq-
common
(
=
${
binary:Version
}
)
, libqt4-
xml
(
>= 4.6.3
)
,
libqtgui4
(
>= 4.6.3
)
,
libqwt6
(
>= 6.0.0
)
, libqt4-
xml
(
>= 4.6.3
)
Depends:
${
shlibs:Depends
}
, masschroq-
common
(
=
${
binary:Version
}
)
, libqt4-
xml
(
>= 4.6.3
)
,
libqtgui4
(
>= 4.6.3
)
,
libqwt6
abi1
(
>= 6.0.0
)
, libqt4-
xml
(
>= 4.6.3
)
Suggests: masschroq-doc, masschroq-gui
Description: Mass Chromatogram Quantification graphical user interface to edit parameters
MassChroQ
(
Mass Chromatogram Quantification
)
software performs quantification
...
...
src/gui/alignementwidget/plot_aligned.h
View file @
62366212
...
...
@@ -35,6 +35,7 @@
#include
<qwt_plot.h>
#include
<qwt_plot_zoomer.h>
#include
<qwt_plot_curve.h>
#include
<qwt_point_data.h>
#include
"../treatment/treatment_box_xic_extract.h"
#include
"../treatment/treatment_box_xic_detect.h"
#include
"../treatment/treatment_box_xic_filter.h"
...
...
templates/share/applications/masschroq-gui.desktop.cmake
View file @
62366212
...
...
@@ -6,4 +6,4 @@ Exec=masschroq_gui %U
Icon=
${
CMAKE_INSTALL_PREFIX
}
/share/masschroq/masschroq.svg
Terminal=false
Type=Application
StartupNotify=true
\ No newline at end of file
StartupNotify=true
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