The way we depend on libraries is computed by the packaging system.

CMakeLists.txt

@@ -132,11 +132,6 @@ endif( CMAKE_BUILD_TYPE MATCHES "RelWithDebInfo" )
 
 message(STATUS "${BoldYellow}CMAKE_BUILD_TYPE: ${CMAKE_BUILD_TYPE}.${ColourReset}")
 
-
-#depending on libpappsomspp version :
-set(LIBPAPPSOMSPP_VERSION "0.8.3")
-configure_file (${CMAKE_SOURCE_DIR}/debian/control.cmake ${CMAKE_SOURCE_DIR}/debian/control  @ONLY)
-
 # Project version
 #
 

debian/control.cmake

-Source: masschroq
-Section: science
-Priority: optional
-Maintainer: Olivier Langella <olivier.langella@u-psud.fr>
-Uploaders: Olivier Langella <olivier.langella@u-psud.fr>
-DM-Upload-Allowed: yes
-Standards-Version: 3.9.1.0
-Build-Depends: debhelper (>= 5),
-               cmake (>= 2.6),
-               libx11-dev,
-               libc6-dev,
-               texlive-latex-extra,
-               texlive-latex-recommended,
-               texlive-fonts-recommended,
-               texlive-science,
-               hevea,
-               inkscape,
-               doxygen,
-               libpappsomspp-dev (>= @LIBPAPPSOMSPP_VERSION@),
-               libpappsomspp-widget-dev (>= @LIBPAPPSOMSPP_VERSION@),
-               libpappsomspp-widget0 (>= @LIBPAPPSOMSPP_VERSION@),
-               libodsstream-dev (>= 0.7.9),
-               qtbase5-dev,
-               libqcustomplot-dev,
-               libqt5xmlpatterns5-dev
-Build-Conflicts: qt3-dev-tools
-Homepage: http://pappso.inra.fr/bioinfo/masschroq/
-
-
-
-Package: masschroq-common
-Architecture: linux-any
-Depends: ${shlibs:Depends},
-         ${misc:Depends},
-         libqt5core5a,
-         libqt5concurrent5,
-         libpappsomspp0  (>= @LIBPAPPSOMSPP_VERSION@),
-         libodsstream0 (>= 0.7.9)
-Replaces: masschroq (<< 1.5.0)
-Conflicts: masschroq (<< 1.5.0)
-Suggests: masschroq, masschroq-gui, masschroq-studio
-Description: Mass Chromatogram Quantification shared libraries
- MassChroQ (Mass Chromatogram Quantification) software performs quantification 
- of data obtained from LC-MS (Liquid Chromatography - Mass Spectrometry) techniques. 
- In particular it performs : retention-time alignment of runs, XIC extraction and filtering, 
- peak detection and quantification.
-
-
-
-Package: masschroq-doc
-Architecture: all
-Depends: ${shlibs:Depends},
-         ${misc:Depends}
-Suggests: masschroq,
-          masschroq-gui,
-          masschroq-studio
-Description: Mass Chromatogram Quantification documentation
- Installs PDF documentation for MassChroQ in /usr/share/doc/masschroq
-
-
-
-Package: masschroq
-Architecture: any
-Depends: ${shlibs:Depends},
-         ${misc:Depends},
-         masschroq-common (= ${binary:Version}),
-         libqt5core5a,
-         libqt5xml5
-Suggests: xtpcpp,
-          masschroq-doc,
-          masschroq-gui,
-          masschroq-studio
-Description: Mass Chromatogram Quantification CLI (Command Line Interface)
- MassChroQ (Mass Chromatogram Quantification) software performs quantification 
- of data obtained from LC-MS (Liquid Chromatography - Mass Spectrometry) techniques. 
- In particular it performs : retention-time alignment of runs, XIC extraction and filtering, 
- peak detection and quantification.
-
-
-
-Package: masschroq-gui
-Architecture: any
-Depends: ${shlibs:Depends},
-         ${misc:Depends},
-         masschroq-common (= ${binary:Version}),
-         libqt5core5a,
-         libqt5gui5,
-         libqt5concurrent5,
-         libqt5network5
-Suggests: masschroq-doc, masschroq-studio
-Description: Mass Chromatogram Quantification graphical user interface
- MassChroQ (Mass Chromatogram Quantification) software performs quantification 
- of data obtained from LC-MS (Liquid Chromatography - Mass Spectrometry) techniques. 
- In particular it performs : retention-time alignment of runs, XIC extraction and filtering, 
- peak detection and quantification.
-
-
-
-Package: masschroq-studio
-Architecture: any
-Depends: ${shlibs:Depends},
-         ${misc:Depends},
-         masschroq-common (= ${binary:Version}),
-         libpappsomspp-widget0 (>= @LIBPAPPSOMSPP_VERSION@),
-         libqt5core5a,
-         libqt5gui5,
-         libqt5xml5
-Suggests: masschroq-doc, masschroq-gui
-Description: Mass Chromatogram Quantification graphical user interface to edit parameters
- MassChroQ (Mass Chromatogram Quantification) software performs quantification 
- of data obtained from LC-MS (Liquid Chromatography - Mass Spectrometry) techniques. 
- In particular it performs : retention-time alignment of runs, XIC extraction and filtering, 
- peak detection and quantification.
-
-
-Package: masschroq-condor
-Architecture: all
-Depends: ${shlibs:Depends},
-         ${misc:Depends},
-         masschroq,
-         htcondor
-Suggests: masschroq-doc,
-          masschroq-gui,
-          masschroq-studio
-Description: Perl script to launch MassChroQ via condor job queue
- Perl script to launch MassChroQ via condor job queue