From c80eea59ec0e9ad9c1815037aa98983e4befb01c Mon Sep 17 00:00:00 2001
From: Olivier Langella <Olivier.Langella@moulon.inra.fr>
Date: Mon, 19 Jun 2017 22:29:00 +0200
Subject: [PATCH] debug message
---
src/CMakeLists.txt | 4 ++--
src/core/identificationgroup.cpp | 2 ++
src/core/proteinmatch.cpp | 5 +++--
3 files changed, 7 insertions(+), 4 deletions(-)
diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt
index d8c38eee5..e91c08516 100644
--- a/src/CMakeLists.txt
+++ b/src/CMakeLists.txt
@@ -28,8 +28,8 @@ SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${Qt5Xml_EXECUTABLE_COMPILE_FLAGS} ${Qt5
#sudo apt-get install libpappsomspp-dev
#FIND_PACKAGE( Pappsomspp REQUIRED )
-# SET (PAPPSOMSPP_DIR "/home/olivier/eclipse/git/pappsomspp")
- SET (PAPPSOMSPP_DIR "/home/langella/developpement/git/pappsomspp")
+ SET (PAPPSOMSPP_DIR "/home/olivier/eclipse/git/pappsomspp")
+# SET (PAPPSOMSPP_DIR "/home/langella/developpement/git/pappsomspp")
SET (PAPPSOMSPP_INCLUDE_DIR "${PAPPSOMSPP_DIR}/src")
SET (PAPPSOMSPP_QT4_LIBRARY "${PAPPSOMSPP_DIR}/cbuild/src/libpappsomspp-qt4.so")
diff --git a/src/core/identificationgroup.cpp b/src/core/identificationgroup.cpp
index 490ebbf5d..6ae01e73c 100644
--- a/src/core/identificationgroup.cpp
+++ b/src/core/identificationgroup.cpp
@@ -116,12 +116,14 @@ unsigned int IdentificationGroup::countProteinMatch(ValidationState state) const
}
void IdentificationGroup::updateAutomaticFilters(const AutomaticFilterParameters & automatic_filter_parameters) {
+ qDebug() << "IdentificationGroup::updateAutomaticFilters begin" ;
for (auto & p_protein_match : _protein_match_list) {
p_protein_match->updateAutomaticFilters(automatic_filter_parameters);
}
if (_p_grp_experiment != nullptr) {
}
+ qDebug() << "IdentificationGroup::updateAutomaticFilters end" ;
}
ProteinMatch * IdentificationGroup::getProteinMatchInstance(const QString accession) {
diff --git a/src/core/proteinmatch.cpp b/src/core/proteinmatch.cpp
index ca7b1f7e7..de44379b6 100644
--- a/src/core/proteinmatch.cpp
+++ b/src/core/proteinmatch.cpp
@@ -64,7 +64,7 @@ bool ProteinMatch::contains(PeptideMatch * peptide_match) const {
}
void ProteinMatch::updateAutomaticFilters(const AutomaticFilterParameters & automatic_filter_parameters) {
- //qDebug() <<"ProteinMatch::updateAutomaticFilters begin " ;
+ qDebug() <<"ProteinMatch::updateAutomaticFilters begin " ;
_proxy_valid = false;
unsigned int number_of_valid_peptides =0;
bool cross_sample = automatic_filter_parameters.getFilterCrossSamplePeptideNumber();
@@ -91,6 +91,7 @@ void ProteinMatch::updateAutomaticFilters(const AutomaticFilterParameters & auto
}
}
+ qDebug() <<"ProteinMatch::updateAutomaticFilters begin 2" ;
if (number_of_valid_peptides == 0) {
_proxy_valid = false;
@@ -104,7 +105,7 @@ void ProteinMatch::updateAutomaticFilters(const AutomaticFilterParameters & auto
}
}
}
- //qDebug() <<"ProteinMatch::updateAutomaticFilters end " << number_of_valid_peptides ;
+ qDebug() <<"ProteinMatch::updateAutomaticFilters end " << number_of_valid_peptides ;
}
const ProteinXtpSp & ProteinMatch::getProteinXtpSp() const {
--
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