diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt index d8c38eee519448ac2cd2c0ae145909ce22305b9b..e91c08516e6aa48c2ae4deea7de8179ac099497e 100644 --- a/src/CMakeLists.txt +++ b/src/CMakeLists.txt @@ -28,8 +28,8 @@ SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${Qt5Xml_EXECUTABLE_COMPILE_FLAGS} ${Qt5 #sudo apt-get install libpappsomspp-dev #FIND_PACKAGE( Pappsomspp REQUIRED ) -# SET (PAPPSOMSPP_DIR "/home/olivier/eclipse/git/pappsomspp") - SET (PAPPSOMSPP_DIR "/home/langella/developpement/git/pappsomspp") + SET (PAPPSOMSPP_DIR "/home/olivier/eclipse/git/pappsomspp") +# SET (PAPPSOMSPP_DIR "/home/langella/developpement/git/pappsomspp") SET (PAPPSOMSPP_INCLUDE_DIR "${PAPPSOMSPP_DIR}/src") SET (PAPPSOMSPP_QT4_LIBRARY "${PAPPSOMSPP_DIR}/cbuild/src/libpappsomspp-qt4.so") diff --git a/src/core/identificationgroup.cpp b/src/core/identificationgroup.cpp index 490ebbf5dded027b3bccb234e6aff6ae86482009..6ae01e73cae6a0239efd5a137d91a9a34a17cd07 100644 --- a/src/core/identificationgroup.cpp +++ b/src/core/identificationgroup.cpp @@ -116,12 +116,14 @@ unsigned int IdentificationGroup::countProteinMatch(ValidationState state) const } void IdentificationGroup::updateAutomaticFilters(const AutomaticFilterParameters & automatic_filter_parameters) { + qDebug() << "IdentificationGroup::updateAutomaticFilters begin" ; for (auto & p_protein_match : _protein_match_list) { p_protein_match->updateAutomaticFilters(automatic_filter_parameters); } if (_p_grp_experiment != nullptr) { } + qDebug() << "IdentificationGroup::updateAutomaticFilters end" ; } ProteinMatch * IdentificationGroup::getProteinMatchInstance(const QString accession) { diff --git a/src/core/proteinmatch.cpp b/src/core/proteinmatch.cpp index ca7b1f7e7d89da77244222e78ff4deb3125d4962..de44379b6e643e38468de60e0c1ca60b6ee6ccbb 100644 --- a/src/core/proteinmatch.cpp +++ b/src/core/proteinmatch.cpp @@ -64,7 +64,7 @@ bool ProteinMatch::contains(PeptideMatch * peptide_match) const { } void ProteinMatch::updateAutomaticFilters(const AutomaticFilterParameters & automatic_filter_parameters) { - //qDebug() <<"ProteinMatch::updateAutomaticFilters begin " ; + qDebug() <<"ProteinMatch::updateAutomaticFilters begin " ; _proxy_valid = false; unsigned int number_of_valid_peptides =0; bool cross_sample = automatic_filter_parameters.getFilterCrossSamplePeptideNumber(); @@ -91,6 +91,7 @@ void ProteinMatch::updateAutomaticFilters(const AutomaticFilterParameters & auto } } + qDebug() <<"ProteinMatch::updateAutomaticFilters begin 2" ; if (number_of_valid_peptides == 0) { _proxy_valid = false; @@ -104,7 +105,7 @@ void ProteinMatch::updateAutomaticFilters(const AutomaticFilterParameters & auto } } } - //qDebug() <<"ProteinMatch::updateAutomaticFilters end " << number_of_valid_peptides ; + qDebug() <<"ProteinMatch::updateAutomaticFilters end " << number_of_valid_peptides ; } const ProteinXtpSp & ProteinMatch::getProteinXtpSp() const {