From 961a73f1db419aa30c8318a476f31a8b0a05fdc0 Mon Sep 17 00:00:00 2001
From: Olivier Langella <Olivier.Langella@moulon.inra.fr>
Date: Tue, 3 Dec 2013 13:48:37 +0100
Subject: [PATCH] make output of spectra unique within a group
---
.../xtandempipeline/output/SpreadSheets/OdsSpectraOutput.java | 4 +++-
1 file changed, 3 insertions(+), 1 deletion(-)
diff --git a/src/fr/inra/pappso/xtandempipeline/output/SpreadSheets/OdsSpectraOutput.java b/src/fr/inra/pappso/xtandempipeline/output/SpreadSheets/OdsSpectraOutput.java
index 786af7d0e..a83a9f4c9 100644
--- a/src/fr/inra/pappso/xtandempipeline/output/SpreadSheets/OdsSpectraOutput.java
+++ b/src/fr/inra/pappso/xtandempipeline/output/SpreadSheets/OdsSpectraOutput.java
@@ -183,8 +183,10 @@ public class OdsSpectraOutput {
logger.debug("pepMassSet numbering");
pepMassSet.numbering();
+ // sample scans may be shared within a group
+ HashSet<HashSampleScan> uniqueHashSampleScan = new HashSet<HashSampleScan>();
+
for (SubGroup sg : group.getSubGroupSet().getSubGroupList()) {
- HashSet<HashSampleScan> uniqueHashSampleScan = new HashSet<HashSampleScan>();
for (HashSampleScanSetProt hashProt : sg
.getHashSampleScanSetProtList()) {
--
GitLab