From 6ffc54c7b81bfef4978a8bb4b4e1066d31dcf10e Mon Sep 17 00:00:00 2001
From: Olivier Langella <olivier.langella@u-psud.fr>
Date: Sat, 30 Sep 2017 07:46:45 +0200
Subject: [PATCH] new tandem preset dialog window
---
src/CMakeLists.txt | 3 +
.../edit_modifications/editmodifications.h | 6 +-
.../edit_tandem_preset_dialog.ui | 116 ++++++++++++++++--
.../edittandempresetdialog.cpp | 56 +++++++++
.../edittandempresetdialog.h | 52 ++++++++
.../tandem_run_dialog/tandem_run_dialog.ui | 4 +-
src/gui/tandem_run_dialog/tandemrundialog.cpp | 14 +++
src/gui/tandem_run_dialog/tandemrundialog.h | 3 +
8 files changed, 238 insertions(+), 16 deletions(-)
create mode 100644 src/gui/edit_tandem_preset_dialog/edittandempresetdialog.cpp
create mode 100644 src/gui/edit_tandem_preset_dialog/edittandempresetdialog.h
diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt
index acd3ea5aa..b751680f9 100644
--- a/src/CMakeLists.txt
+++ b/src/CMakeLists.txt
@@ -118,6 +118,7 @@ SET(XTPCPP_SRCS
./gui/choose_modification_dialog/choosemodificationdialog.cpp
./gui/edit_label_methods/editlabelmethods.cpp
./gui/edit_modifications/editmodifications.cpp
+ ./gui/edit_tandem_preset_dialog/edittandempresetdialog.cpp
./gui/export_spreadsheet_dialog/exportspreadsheetdialog.cpp
./gui/load_results_dialog/loadresultsdialog.cpp
./gui/mainwindow.cpp
@@ -152,6 +153,7 @@ SET (GUI_UIS
./gui/choose_modification_dialog/choose_modification_dialog.ui
./gui/edit_label_methods/edit_label_methods.ui
./gui/edit_modifications/edit_modifications.ui
+ ./gui/edit_tandem_preset_dialog/edit_tandem_preset_dialog.ui
./gui/export_spreadsheet_dialog/export_spreadsheet_dialog.ui
./gui/load_results_dialog/load_results_dialog.ui
./gui/main.ui
@@ -173,6 +175,7 @@ SET(XTPCPP_MOC_HDRS
./gui/choose_modification_dialog/choosemodificationdialog.h
./gui/edit_label_methods/editlabelmethods.h
./gui/edit_modifications/editmodifications.h
+ ./gui/edit_tandem_preset_dialog/edittandempresetdialog.h
./gui/export_spreadsheet_dialog/exportspreadsheetdialog.h
./gui/load_results_dialog/loadresultsdialog.h
./gui/mainwindow.h
diff --git a/src/gui/edit_modifications/editmodifications.h b/src/gui/edit_modifications/editmodifications.h
index 530502214..04a6dce6c 100644
--- a/src/gui/edit_modifications/editmodifications.h
+++ b/src/gui/edit_modifications/editmodifications.h
@@ -43,10 +43,10 @@ public:
explicit EditModifications(ProjectWindow * parent = 0);
~EditModifications();
-
+
void setProjectSp(ProjectSp project_sp);
-
- public slots:
+
+public slots:
void ItemClicked (QModelIndex index );
void ItemDoubleClicked (QModelIndex index );
private slots:
diff --git a/src/gui/edit_tandem_preset_dialog/edit_tandem_preset_dialog.ui b/src/gui/edit_tandem_preset_dialog/edit_tandem_preset_dialog.ui
index af1cf9576..6269edd18 100644
--- a/src/gui/edit_tandem_preset_dialog/edit_tandem_preset_dialog.ui
+++ b/src/gui/edit_tandem_preset_dialog/edit_tandem_preset_dialog.ui
@@ -14,7 +14,7 @@
<enum>Qt::CustomContextMenu</enum>
</property>
<property name="windowTitle">
- <string>Labeling methods editor</string>
+ <string>X!Tandem preset editor</string>
</property>
<layout class="QVBoxLayout" name="verticalLayout_2">
<item>
@@ -27,6 +27,39 @@
</property>
</widget>
</item>
+ <item>
+ <layout class="QHBoxLayout" name="horizontalLayout_2">
+ <item>
+ <widget class="QComboBox" name="preset_combo_box"/>
+ </item>
+ <item>
+ <widget class="QPushButton" name="pushButton_5">
+ <property name="sizePolicy">
+ <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
+ <horstretch>0</horstretch>
+ <verstretch>0</verstretch>
+ </sizepolicy>
+ </property>
+ <property name="text">
+ <string>New</string>
+ </property>
+ </widget>
+ </item>
+ <item>
+ <widget class="QPushButton" name="pushButton_6">
+ <property name="sizePolicy">
+ <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
+ <horstretch>0</horstretch>
+ <verstretch>0</verstretch>
+ </sizepolicy>
+ </property>
+ <property name="text">
+ <string>Preset directory</string>
+ </property>
+ </widget>
+ </item>
+ </layout>
+ </item>
<item>
<widget class="QWidget" name="widget" native="true">
<layout class="QGridLayout" name="gridLayout">
@@ -39,13 +72,22 @@
<property name="currentIndex">
<number>0</number>
</property>
- <widget class="QWidget" name="tab">
+ <widget class="QWidget" name="spectrum_tab">
<attribute name="title">
<string>Spectrum</string>
</attribute>
<layout class="QVBoxLayout" name="verticalLayout_4">
<item>
<widget class="QScrollArea" name="scrollArea">
+ <property name="sizePolicy">
+ <sizepolicy hsizetype="Expanding" vsizetype="Expanding">
+ <horstretch>0</horstretch>
+ <verstretch>0</verstretch>
+ </sizepolicy>
+ </property>
+ <property name="horizontalScrollBarPolicy">
+ <enum>Qt::ScrollBarAsNeeded</enum>
+ </property>
<property name="widgetResizable">
<bool>true</bool>
</property>
@@ -54,8 +96,8 @@
<rect>
<x>0</x>
<y>0</y>
- <width>551</width>
- <height>161</height>
+ <width>567</width>
+ <height>198</height>
</rect>
</property>
<layout class="QVBoxLayout" name="verticalLayout_3">
@@ -128,13 +170,10 @@
</property>
</widget>
</item>
- <item row="1" column="1">
- <widget class="QSpinBox" name="spinBox"/>
- </item>
<item row="3" column="2">
<widget class="QPushButton" name="pushButton_4">
<property name="sizePolicy">
- <sizepolicy hsizetype="Fixed" vsizetype="Fixed">
+ <sizepolicy hsizetype="Minimum" vsizetype="Fixed">
<horstretch>0</horstretch>
<verstretch>0</verstretch>
</sizepolicy>
@@ -144,9 +183,6 @@
</property>
</widget>
</item>
- <item row="2" column="1">
- <widget class="QSpinBox" name="spinBox_2"/>
- </item>
<item row="3" column="1">
<widget class="QComboBox" name="comboBox_2">
<item>
@@ -175,6 +211,12 @@
</property>
</widget>
</item>
+ <item row="1" column="1">
+ <widget class="QLineEdit" name="lineEdit"/>
+ </item>
+ <item row="2" column="1">
+ <widget class="QLineEdit" name="lineEdit_2"/>
+ </item>
</layout>
</item>
<item>
@@ -200,6 +242,58 @@
<attribute name="title">
<string>Protein</string>
</attribute>
+ <layout class="QVBoxLayout" name="verticalLayout_5">
+ <item>
+ <widget class="QScrollArea" name="scrollArea_2">
+ <property name="widgetResizable">
+ <bool>true</bool>
+ </property>
+ <widget class="QWidget" name="scrollAreaWidgetContents_2">
+ <property name="geometry">
+ <rect>
+ <x>0</x>
+ <y>0</y>
+ <width>98</width>
+ <height>72</height>
+ </rect>
+ </property>
+ <layout class="QVBoxLayout" name="verticalLayout_6">
+ <item>
+ <layout class="QGridLayout" name="gridLayout_3">
+ <item row="0" column="0">
+ <widget class="QLabel" name="label_5">
+ <property name="text">
+ <string>TextLabel</string>
+ </property>
+ </widget>
+ </item>
+ <item row="1" column="0">
+ <widget class="QLabel" name="label_6">
+ <property name="text">
+ <string>TextLabel</string>
+ </property>
+ </widget>
+ </item>
+ </layout>
+ </item>
+ <item>
+ <spacer name="verticalSpacer_2">
+ <property name="orientation">
+ <enum>Qt::Vertical</enum>
+ </property>
+ <property name="sizeHint" stdset="0">
+ <size>
+ <width>20</width>
+ <height>40</height>
+ </size>
+ </property>
+ </spacer>
+ </item>
+ </layout>
+ </widget>
+ </widget>
+ </item>
+ </layout>
</widget>
</widget>
<widget class="QPlainTextEdit" name="plainTextEdit"/>
diff --git a/src/gui/edit_tandem_preset_dialog/edittandempresetdialog.cpp b/src/gui/edit_tandem_preset_dialog/edittandempresetdialog.cpp
new file mode 100644
index 000000000..037662a12
--- /dev/null
+++ b/src/gui/edit_tandem_preset_dialog/edittandempresetdialog.cpp
@@ -0,0 +1,56 @@
+/**
+ * \file gui/edit_tandem_preset_dialog/edittandempresetdialog.cpp
+ * \date 30/9/2017
+ * \author Olivier Langella
+ * \brief edit tandem preset dialog
+ */
+
+/*******************************************************************************
+* Copyright (c) 2017 Olivier Langella <olivier.langella@u-psud.fr>.
+*
+* This file is part of XTPcpp.
+*
+* XTPcpp is free software: you can redistribute it and/or modify
+* it under the terms of the GNU General Public License as published by
+* the Free Software Foundation, either version 3 of the License, or
+* (at your option) any later version.
+*
+* XTPcpp is distributed in the hope that it will be useful,
+* but WITHOUT ANY WARRANTY; without even the implied warranty of
+* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+* GNU General Public License for more details.
+*
+* You should have received a copy of the GNU General Public License
+* along with XTPcpp. If not, see <http://www.gnu.org/licenses/>.
+*
+* Contributors:
+* Olivier Langella <olivier.langella@u-psud.fr> - initial API and implementation
+******************************************************************************/
+
+#include "edittandempresetdialog.h"
+#include <QDebug>
+
+#include "ui_edit_tandem_preset_dialog.h"
+
+
+EditTandemPresetDialog::EditTandemPresetDialog(QWidget * parent):
+ QDialog(parent),
+ ui(new Ui::EditTandemPresetView)
+{
+ qDebug() << "EditTandemPresetDialog::EditTandemPresetDialog begin";
+ ui->setupUi(this);
+ this->setModal(true);
+
+#if QT_VERSION >= 0x050000
+ // Qt5 code
+#else
+// Qt4 code
+
+#endif
+ qDebug() << "EditTandemPresetDialog::EditTandemPresetDialog end";
+}
+
+EditTandemPresetDialog::~EditTandemPresetDialog()
+{
+ delete ui;
+}
diff --git a/src/gui/edit_tandem_preset_dialog/edittandempresetdialog.h b/src/gui/edit_tandem_preset_dialog/edittandempresetdialog.h
new file mode 100644
index 000000000..cacea1c52
--- /dev/null
+++ b/src/gui/edit_tandem_preset_dialog/edittandempresetdialog.h
@@ -0,0 +1,52 @@
+/**
+ * \file gui/edit_tandem_preset_dialog/edittandempresetdialog.h
+ * \date 30/9/2017
+ * \author Olivier Langella
+ * \brief edit tandem preset dialog
+ */
+
+/*******************************************************************************
+* Copyright (c) 2017 Olivier Langella <olivier.langella@u-psud.fr>.
+*
+* This file is part of XTPcpp.
+*
+* XTPcpp is free software: you can redistribute it and/or modify
+* it under the terms of the GNU General Public License as published by
+* the Free Software Foundation, either version 3 of the License, or
+* (at your option) any later version.
+*
+* XTPcpp is distributed in the hope that it will be useful,
+* but WITHOUT ANY WARRANTY; without even the implied warranty of
+* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+* GNU General Public License for more details.
+*
+* You should have received a copy of the GNU General Public License
+* along with XTPcpp. If not, see <http://www.gnu.org/licenses/>.
+*
+* Contributors:
+* Olivier Langella <olivier.langella@u-psud.fr> - initial API and implementation
+******************************************************************************/
+
+#ifndef EDITTANDEMPRESETDIALOG_H
+#define EDITTANDEMPRESETDIALOG_H
+
+#include<QDialog>
+
+namespace Ui {
+class EditTandemPresetView;
+}
+
+class EditTandemPresetDialog: public QDialog
+{
+ Q_OBJECT
+
+public:
+ explicit EditTandemPresetDialog(QWidget * parent);
+ ~EditTandemPresetDialog();
+
+
+private:
+ Ui::EditTandemPresetView *ui;
+};
+
+#endif // EDITTANDEMPRESETDIALOG_H
diff --git a/src/gui/tandem_run_dialog/tandem_run_dialog.ui b/src/gui/tandem_run_dialog/tandem_run_dialog.ui
index 79fa385b9..6d1ffcbb8 100644
--- a/src/gui/tandem_run_dialog/tandem_run_dialog.ui
+++ b/src/gui/tandem_run_dialog/tandem_run_dialog.ui
@@ -369,7 +369,7 @@
<sender>pushButton_7</sender>
<signal>clicked()</signal>
<receiver>TandemRunDialog</receiver>
- <slot>selectPresetDirectory()</slot>
+ <slot>editPresets()</slot>
<hints>
<hint type="sourcelabel">
<x>541</x>
@@ -390,6 +390,6 @@
<slot>selectMzFiles()</slot>
<slot>selectOutputDirectory()</slot>
<slot>setPresetName(QString)</slot>
- <slot>selectPresetDirectory()</slot>
+ <slot>editPresets()</slot>
</slots>
</ui>
diff --git a/src/gui/tandem_run_dialog/tandemrundialog.cpp b/src/gui/tandem_run_dialog/tandemrundialog.cpp
index 2a6ff3ebc..be03ed1bc 100644
--- a/src/gui/tandem_run_dialog/tandemrundialog.cpp
+++ b/src/gui/tandem_run_dialog/tandemrundialog.cpp
@@ -139,6 +139,18 @@ void TandemRunDialog::selectPresetDirectory() {
// tr("Error choosing identification result files : %1").arg(error.qwhat()), error);
}
}
+
+void TandemRunDialog::editPresets() {
+ QSettings settings;
+ QString default_preset_location = settings.value("path/tandemrun_preset_directory", "").toString();
+
+
+ if (_p_preset_dialog == nullptr) {
+ _p_preset_dialog = new EditTandemPresetDialog(this);
+ }
+ _p_preset_dialog->show();
+
+}
void TandemRunDialog::selectOutputDirectory() {
try {
QSettings settings;
@@ -218,3 +230,5 @@ TandemRunBatch TandemRunDialog::getTandemRunBatch() const {
tandem_run_batch._number_of_threads = ui->thread_spin_box->value();
return tandem_run_batch;
}
+
+
diff --git a/src/gui/tandem_run_dialog/tandemrundialog.h b/src/gui/tandem_run_dialog/tandemrundialog.h
index 83944614e..c56b958ef 100644
--- a/src/gui/tandem_run_dialog/tandemrundialog.h
+++ b/src/gui/tandem_run_dialog/tandemrundialog.h
@@ -33,6 +33,7 @@
#include <QDialog>
#include <QStringListModel>
#include "../../core/tandem_run/tandemrunbatch.h"
+#include "../edit_tandem_preset_dialog/edittandempresetdialog.h"
namespace Ui {
class TandemRunDialog;
@@ -55,6 +56,7 @@ public slots:
void selectMzFiles();
void selectOutputDirectory();
void selectPresetDirectory();
+ void editPresets();
void setPresetName(QString preset_name);
signals:
@@ -62,6 +64,7 @@ private:
void fillPresetComboBox();
private:
Ui::TandemRunDialog *ui;
+ EditTandemPresetDialog * _p_preset_dialog=nullptr;
QStringListModel * _p_fasta_file_list;
QStringListModel * _p_mz_file_list;
QString _previous_preset_file;
--
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