From 364871c80c376a83af540f26232520b3933f898a Mon Sep 17 00:00:00 2001
From: langella <langella@b8ef2a07-7df7-436f-90b9-41648038564b>
Date: Wed, 20 Feb 2013 10:05:44 +0000
Subject: [PATCH] declare deprecated function

git-svn-id: https://subversion.renater.fr/xtandempipeline/trunk@345 b8ef2a07-7df7-436f-90b9-41648038564b
---
 .../inra/pappso/xtandempipeline/class_msms/Identification.java  | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/xtandempipeline/src/fr/inra/pappso/xtandempipeline/class_msms/Identification.java b/xtandempipeline/src/fr/inra/pappso/xtandempipeline/class_msms/Identification.java
index 8610beabd..76c6390ae 100644
--- a/xtandempipeline/src/fr/inra/pappso/xtandempipeline/class_msms/Identification.java
+++ b/xtandempipeline/src/fr/inra/pappso/xtandempipeline/class_msms/Identification.java
@@ -35,6 +35,7 @@ public class Identification {
 	private DatabaseSet databaseSet = new DatabaseSet();
 
 	public Identification() {
+		logger.debug("Identification constructor");
 		this.peptide_liste = new ArrayList<PeptideId>();
 		this.protein_liste = new MatchList();
 		this.grouping = null;
@@ -85,6 +86,7 @@ public class Identification {
 		return (this.protein_liste);
 	}
 
+	@Deprecated //please use getMsRunSet as a replacement
 	public MsRunSet get_samples() {
 		return (msRunSet);
 	}
-- 
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