diff --git a/ner-taxa.plan b/ner-taxa.plan index 6268a1e919650e6a31ae17f018f11aec3ac0ed03..6def60b37007dcb4833c060b85e4efd674b6f43f 100644 --- a/ner-taxa.plan +++ b/ner-taxa.plan @@ -13,8 +13,6 @@ <dict class="TabularProjector"> <targetLayerName>ambiguousTaxa</targetLayerName> - <!--<dictFile>ancillaries/extended-microorganisms-taxonomy/taxa+id_full.txt</dictFile>--> - <trieSource>ancillaries/extended-microorganisms-taxonomy/taxa+id_full.trie</trieSource> <matchStartCaseInsensitive/> <valueFeatures>,taxid,canonical-name,path,pos,rank,species-taxid,species-name</valueFeatures> <constantAnnotationFeatures>source=NCBI</constantAnnotationFeatures> diff --git a/select-taxa.plan b/select-taxa.plan index 46d293d5aae0c675fa75d13216832825256935ff..d1ee31e0e30e16c4187f51192c79ab1c95d606a0 100644 --- a/select-taxa.plan +++ b/select-taxa.plan @@ -6,11 +6,11 @@ </param> <param name="featureName"> - <alias module="featureName" param="featureValue"/> + <alias module="names.feature" param="featureValue"/> </param> <param name="layerName"> - <alias module="layerName" param="featureValue"/> + <alias module="names.layer" param="featureValue"/> </param> <param name="column"> @@ -22,16 +22,18 @@ <alias module="tag" param="select"/> </param> - <featureName class="SetFeature"> - <target>$</target> - <featureName>select-taxa-feature-name</featureName> - </featureName> - - <layerName class="SetFeature"> - <target>$</target> - <featureName>select-taxa-layer-name</featureName> - </layerName> + <names> + <feature class="SetFeature"> + <target>$</target> + <featureName>select-taxa-feature-name</featureName> + </feature> + <layer class="SetFeature"> + <target>$</target> + <featureName>select-taxa-layer-name</featureName> + </layer> + </names> + <tag> <select>taxids</select>