From f33171b952c243fdbe164149869a222966145f3c Mon Sep 17 00:00:00 2001
From: Robert Bossy <Robert.Bossy@inra.fr>
Date: Tue, 5 Apr 2022 20:04:37 +0200
Subject: [PATCH] fix #15
---
rewrite-taxonomy.snakefile | 3 +--
1 file changed, 1 insertion(+), 2 deletions(-)
diff --git a/rewrite-taxonomy.snakefile b/rewrite-taxonomy.snakefile
index ab0b78d..753c6d1 100644
--- a/rewrite-taxonomy.snakefile
+++ b/rewrite-taxonomy.snakefile
@@ -3,7 +3,6 @@ configfile: 'config.yaml'
rule all:
input:
- config['OUTDIR'] + '/finish.txt',
config['OUTDIR'] + '/taxid_microorganisms.txt',
config['OUTDIR'] + '/taxa+id_microorganisms.txt',
config['OUTDIR'] + '/taxa+id_microorganisms.trie',
@@ -13,7 +12,7 @@ rule all:
config['OUTDIR'] + '/microorganisms-roots-paths.txt'
-rule check:
+rule compile:
input:
config['OUTDIR'] + '/taxa+id_{root}.txt'
--
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