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migale
affiliationExplorer
Commits
e6d5d708
Commit
e6d5d708
authored
Feb 19, 2020
by
mahendra-mariadassou
Browse files
Fix yet another typo in download button
parent
12623115
Changes
1
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R/app_server.R
View file @
e6d5d708
...
...
@@ -116,8 +116,8 @@ app_server <- function(input, output, session) {
## Update taxonomy of object phyloseq
phyloseq
::
tax_table
(
physeq
)[
rownames
(
data
$
cleaned
),
]
<-
data
$
cleaned
## revert short OTU names back to original names
dict
<-
setNames
(
object
=
otu_dictionary
$
sequence
,
nm
=
otu_dictionary
$
OTU
)
dict
<-
setNames
(
object
=
dict
$
sequence
,
nm
=
dict
$
OTU
)
phyloseq
::
taxa_names
(
physeq
)
<-
dict
[
phyloseq
::
taxa_names
(
physeq
)]
## Export
phyloseq.extended
::
write_phyloseq
(
...
...
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