Skip to content
GitLab
Menu
Projects
Groups
Snippets
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Menu
Open sidebar
migale
affiliationExplorer
Commits
2b5819bd
Commit
2b5819bd
authored
Oct 30, 2020
by
mahendra-mariadassou
Browse files
Fix bug leading to errors with FROGS STATS
parent
9c4b612d
Changes
1
Hide whitespace changes
Inline
Side-by-side
R/app_server.R
View file @
2b5819bd
...
...
@@ -152,7 +152,7 @@ app_server <- function(input, output, session) {
## revert short OTU names back to original names
dict
<-
setNames
(
object
=
dict
$
sequence
,
nm
=
dict
$
OTU
)
phyloseq
::
taxa_names
(
physeq
)
<-
dict
[
phyloseq
::
taxa_names
(
physeq
)]
phyloseq
::
taxa_names
(
physeq
)
<-
dict
[
phyloseq
::
taxa_names
(
physeq
)]
%>%
unname
()
## Export
phyloseq.extended
::
write_phyloseq
(
physeq
=
physeq
,
...
...
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment