Merge requests · metexplore / met4j

Pathway network creation

!28 · created Feb 09, 2023 by Clement Frainay develop met4j-graph met4j-toolbox
- MERGED
- Approved
- 2
updated Feb 14, 2023
Fix handling of weighted metabolic graph as undirected

!26 · created Jan 05, 2023 by Clement Frainay develop bug met4j-graph met4j-toolbox
- MERGED
- Approved
- 1
updated Jan 06, 2023
Feature/bipartite distance matrix app2

!25 · created Jan 05, 2023 by Louison Fresnais develop
- MERGED
- 3
updated Jan 12, 2023
Expand SBML Mapping

!24 · created Nov 17, 2022 by Clement Frainay develop
- MERGED
- 6
updated Dec 02, 2022
reaction balance

!23 · created Nov 17, 2022 by Ludovic Cottret met4j-core met4j-toolbox
- MERGED
- 1
updated Dec 02, 2022
Feature/set ids from file

!22 · created Nov 14, 2022 by Ludovic Cottret develop met4j-core met4j-toolbox
- MERGED
- 0
updated Nov 15, 2022
Feature/get seeds

!20 · created Sep 22, 2022 by Clement Frainay develop met4j-toolbox
- MERGED
- Approved
- 3
updated Oct 21, 2022
create apps to export degree and chemical similarity weights for compound graphs

!19 · created Sep 16, 2022 by Clement Frainay develop
- MERGED
- 1
updated Sep 22, 2022
Feature/get distance manyto many

!18 · created Jul 28, 2022 by Louison Fresnais develop
- MERGED
- Approved
- 5
updated Dec 07, 2022
Feature/app sbml extract 3 of 4 checklist items completed

!17 · created Jul 28, 2022 by Clement Frainay develop met4j-toolbox
- MERGED
- 1
updated Jul 29, 2022
Features/reaction side cpds

!16 · created Jul 19, 2022 by Louison Fresnais develop
- MERGED
- Approved
- 11
updated Sep 16, 2022
Draft: parallelize several GetShortestPath loops

!15 · created May 11, 2022 by Louison Fresnais develop met4j-graph
- MERGED
- Approved
- 6
updated Jun 01, 2022
Docker

!13 · created Apr 25, 2022 by Ludovic Cottret develop cicd
- MERGED
- 0
updated Apr 25, 2022
Singularity

!12 · created Apr 22, 2022 by Ludovic Cottret develop cicd
- MERGED
- 0
updated Apr 22, 2022
[toolbox] Galaxy wrappers and json description

!11 · created Apr 01, 2022 by Ludovic Cottret develop met4j-toolbox
- MERGED
- Approved
- 0
updated May 23, 2022
[ToolBox] Advanced compound graph

!10 · created Mar 18, 2022 by Clement Frainay develop met4j-toolbox
- MERGED
- 1
updated Apr 19, 2022
Expand Toolbox with SBML scrapping app

!9 · created Mar 18, 2022 by Clement Frainay develop met4j-toolbox
- MERGED
- Approved
- 5
updated Apr 19, 2022
handling mutliple compartments in side compound scan

!8 · created Mar 16, 2022 by Clement Frainay develop met4j-toolbox
- MERGED
- Approved
- 9
updated Apr 01, 2022
Feature/extract sub reaction net

!7 · created Feb 04, 2022 by Clement Frainay develop
- MERGED
- 5
updated Feb 22, 2022
Remove equals overriding of BioEntity and protects creation of BioParticipant

!6 · created Jan 21, 2022 by Ludovic Cottret develop met4j-core
- MERGED
- Approved
- 0
updated Jan 25, 2022