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Commit b3df96bd authored by lcottret's avatar lcottret
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Finish tag 0.10

parents 767a1234 781cbe56
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.gitlab-ci.yml
View file @ b3df96bd
......@@ -74,7 +74,7 @@ buildSingularity:
- singularity push --docker-username "${CI_REGISTRY_USER}" --docker-password "${CI_REGISTRY_PASSWORD}" met4j-toolbox.sif oras://"$CI_REGISTRY_IMAGE"/met4j-singularity:"$CI_COMMIT_TAG"
rules:
- if: $CI_COMMIT_BRANCH == $CI_DEFAULT_BRANCH
when: always
when: manual
- if: $CI_COMMIT_BRANCH != $CI_DEFAULT_BRANCH
when: manual
......@@ -87,7 +87,7 @@ buildDockerProdGitlab:
- docker push "$CI_REGISTRY/metexplore/met4j/met4j-docker:latest"
rules:
- if: $CI_COMMIT_BRANCH == $CI_DEFAULT_BRANCH
when: always
when: manual
- if: $CI_COMMIT_BRANCH != $CI_DEFAULT_BRANCH
when: manual
......@@ -100,7 +100,7 @@ buildDockerProdDockerhub:
- docker push "$DOCKERHUB_IMAGE:latest"
rules:
- if: $CI_COMMIT_BRANCH == $CI_DEFAULT_BRANCH
when: always
when: manual
- if: $CI_COMMIT_BRANCH != $CI_DEFAULT_BRANCH
when: manual
......
CHANGELOG.md
View file @ b3df96bd
......@@ -4,6 +4,18 @@ All notable changes to this project will be documented in this file.
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
## 0.10.0
### Features
[met4j-toolbox] New app: networkAnalysis.CompoundNet: Advanced compound graph building
[met4j-toolbox] New app: attributes.ExtractPathways: SBML sub network creation from a list of pathways
[met4j-toolbox] New app: attributes.ExtractSbmlAnnot: Extract sbml annotations
[met4j-toolbox] App improvements: networkAnalysis.SideCompoundsScan: Handle multiple compartments
## 0.9.1
### Fixed
......
coverage/pom.xml
View file @ b3df96bd
......@@ -44,7 +44,7 @@
<parent>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
<relativePath>../pom.xml</relativePath>
</parent>
......
met4j-chemUtils/pom.xml
View file @ b3df96bd
......@@ -5,7 +5,7 @@
<parent>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</parent>
<properties>
......@@ -35,7 +35,7 @@
<dependency>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j-core</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</dependency>
<!-- https://mvnrepository.com/artifact/org.mockito/mockito-all -->
<dependency>
......
met4j-core/pom.xml
View file @ b3df96bd
......@@ -5,7 +5,7 @@
<parent>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</parent>
<scm>
......
met4j-graph/pom.xml
View file @ b3df96bd
......@@ -5,7 +5,7 @@
<parent>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</parent>
<artifactId>met4j-graph</artifactId>
......@@ -40,7 +40,7 @@
<dependency>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j-core</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</dependency>
<dependency>
<groupId>org.apache.commons</groupId>
......@@ -50,12 +50,12 @@
<dependency>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j-mathUtils</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</dependency>
<dependency>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j-chemUtils</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</dependency>
</dependencies>
......
met4j-io/pom.xml
View file @ b3df96bd
......@@ -6,7 +6,7 @@
<parent>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</parent>
<artifactId>met4j-io</artifactId>
......@@ -25,7 +25,7 @@
<dependency>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j-core</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</dependency>
<dependency>
<groupId>org.sbml.jsbml</groupId>
......
met4j-mapping/pom.xml
View file @ b3df96bd
......@@ -4,7 +4,7 @@
<parent>
<artifactId>met4j</artifactId>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</parent>
<modelVersion>4.0.0</modelVersion>
......@@ -19,7 +19,7 @@
<dependency>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j-core</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</dependency>
<dependency>
<groupId>junit</groupId>
......
met4j-mathUtils/pom.xml
View file @ b3df96bd
......@@ -5,7 +5,7 @@
<parent>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</parent>
......
met4j-toolbox/pom.xml
View file @ b3df96bd
......@@ -5,7 +5,7 @@
<parent>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</parent>
<artifactId>met4j-toolbox</artifactId>
......@@ -33,32 +33,32 @@
<dependency>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j-chemUtils</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</dependency>
<dependency>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j-io</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</dependency>
<dependency>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j-core</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</dependency>
<dependency>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j-mathUtils</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</dependency>
<dependency>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j-graph</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</dependency>
<dependency>
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j-mapping</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
</dependency>
<!-- https://mvnrepository.com/artifact/com.googlecode.json-simple/json-simple -->
<dependency>
......
pom.xml
View file @ b3df96bd
......@@ -4,7 +4,7 @@
<groupId>fr.inrae.toulouse.metexplore</groupId>
<artifactId>met4j</artifactId>
<version>0.9.1-SNAPSHOT</version>
<version>0.10.0-SNAPSHOT</version>
<packaging>pom</packaging>
<name>met4j</name>
......
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